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    CCNH cyclin H [ Bos taurus (domestic cattle) ]

    Gene ID: 615512, updated on 4-Oct-2024

    Summary

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    Official Symbol
    CCNHprovided by VGNC
    Official Full Name
    cyclin Hprovided by VGNC
    Primary source
    VGNC:VGNC:97249
    See related
    BGD:BT22126; Ensembl:ENSBTAG00000009566
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CCNH in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (87037344..87067806, complement)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene S-adenosylmethionine decarboxylase proenzyme-like Neighboring gene RAS p21 protein activator 1 Neighboring gene heterogeneous nuclear ribonucleoprotein A3-like Neighboring gene tubulin beta chain-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription factor TFIIK complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclin-H

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079788.2 → NP_001073256.1  cyclin-H

      See identical proteins and their annotated locations for NP_001073256.1

      Status: PROVISIONAL

      Source sequence(s)
      BC103224
      UniProtKB/Swiss-Prot
      Q3ZBL9
      UniProtKB/TrEMBL
      A0AAA9RT84
      Related
      ENSBTAP00000034897.5, ENSBTAT00000035017.5
      Conserved Domains (3) summary
      TIGR00569
      Location:2 → 308
      ccl1; cyclin ccl1
      smart00385
      Location:62 → 152
      CYCLIN; domain present in cyclins, TFIIB and Retinoblastoma
      pfam16899
      Location:162 → 262
      Cyclin_C_2; Cyclin C-terminal domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      87037344..87067806 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005209738.5 → XP_005209795.1  cyclin-H isoform X4

      See identical proteins and their annotated locations for XP_005209795.1

      UniProtKB/TrEMBL
      A0AAA9RT84
      Related
      ENSBTAP00000066939.2, ENSBTAT00000078818.2
      Conserved Domains (1) summary
      TIGR00569
      Location:2 → 308
      ccl1; cyclin ccl1

    2. XM_005209737.5 → XP_005209794.1  cyclin-H isoform X3

      See identical proteins and their annotated locations for XP_005209794.1

      UniProtKB/TrEMBL
      A0AAA9RT84
      Conserved Domains (1) summary
      TIGR00569
      Location:2 → 308
      ccl1; cyclin ccl1

    3. XM_005209736.5 → XP_005209793.1  cyclin-H isoform X2

      See identical proteins and their annotated locations for XP_005209793.1

      UniProtKB/TrEMBL
      A0AAA9RT84
      Conserved Domains (1) summary
      TIGR00569
      Location:2 → 308
      ccl1; cyclin ccl1

    4. XM_005209735.5 → XP_005209792.1  cyclin-H isoform X1

      See identical proteins and their annotated locations for XP_005209792.1

      UniProtKB/TrEMBL
      A0A3Q1ML13, A0AAA9RT84
      Related
      ENSBTAP00000071635.1, ENSBTAT00000074312.2
      Conserved Domains (1) summary
      TIGR00569
      Location:2 → 308
      ccl1; cyclin ccl1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3ZBL9.1 GenPept UniProtKB/Swiss-Prot:Q3ZBL9

    Gene LinkOut

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