U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    GPC3 glypican 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 615239, updated on 4-Oct-2024

    Summary

    Official Symbol
    GPC3provided by VGNC
    Official Full Name
    glypican 3provided by VGNC
    Primary source
    VGNC:VGNC:29525
    See related
    BGD:BT13493; Ensembl:ENSBTAG00000020406
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See GPC3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (17366004..17829177, complement)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene glypican 4 Neighboring gene 5S ribosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC786942 Neighboring gene thymosin beta-4-like Neighboring gene ferritin light chain Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene microRNA mir-92a-2 Neighboring gene microRNA mir-363

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    General gene information

    Markers

    Clone Names

    • MGC128119

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in positive regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in regulation of protein localization to membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in collagen-containing extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001035463.2NP_001030540.1  glypican-3 precursor

      See identical proteins and their annotated locations for NP_001030540.1

      Status: PROVISIONAL

      Source sequence(s)
      BC103006
      UniProtKB/TrEMBL
      A0AAA9TMT4, F1MNA7, Q3ZBZ6
      Related
      ENSBTAP00000027192.6, ENSBTAT00000027192.7
      Conserved Domains (1) summary
      pfam01153
      Location:14577
      Glypican; Glypican

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      17366004..17829177 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)