U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    FBXO40 F-box protein 40 [ Bos taurus (domestic cattle) ]

    Gene ID: 613597, updated on 4-Oct-2024

    Summary

    Official Symbol
    FBXO40provided by VGNC
    Official Full Name
    F-box protein 40provided by VGNC
    Primary source
    VGNC:VGNC:28911
    See related
    Ensembl:ENSBTAG00000014508
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See FBXO40 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (66092304..66111702)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene ras-related protein Rap-1b-like Neighboring gene arginine-fifty homeobox Neighboring gene hematopoietic cell-specific Lyn substrate 1 Neighboring gene golgin B1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206393.1NP_001193322.1  F-box only protein 40

      See identical proteins and their annotated locations for NP_001193322.1

      Status: INFERRED

      Source sequence(s)
      NKLS02000001
      UniProtKB/TrEMBL
      F1N1C5
      Related
      ENSBTAP00000019285.7, ENSBTAT00000019285.7
      Conserved Domains (2) summary
      pfam15965
      Location:12104
      zf-TRAF_2; TRAF-like zinc-finger
      pfam15966
      Location:577685
      F-box_4; F-box

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      66092304..66111702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015471580.3XP_015327066.1  F-box only protein 40 isoform X1

      UniProtKB/TrEMBL
      F1N1C5
      Conserved Domains (2) summary
      pfam15965
      Location:12104
      zf-TRAF_2; TRAF-like zinc-finger
      pfam15966
      Location:577685
      F-box_4; F-box