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    UBE2E3 ubiquitin conjugating enzyme E2 E3 [ Canis lupus familiaris (dog) ]

    Gene ID: 612823, updated on 17-Aug-2024

    Summary

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    Official Symbol
    UBE2E3provided by VGNC
    Official Full Name
    ubiquitin conjugating enzyme E2 E3provided by VGNC
    Primary source
    VGNC:VGNC:53110
    See related
    Ensembl:ENSCAFG00845026988
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See UBE2E3 in Genome Data Viewer
    Location:
    chromosome: 36
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 36 NC_051840.1 (24364757..24450910)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 36 NC_006618.4 (24219719..24305729)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 36 NC_049257.1 (24552821..24640159)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 36 NC_049296.1 (24454603..24540580)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 36 NC_049777.1 (24419433..24505500)

    Chromosome 36 - NC_051840.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111094258 Neighboring gene uncharacterized LOC111094259 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene uncharacterized LOC119867798 Neighboring gene integrin subunit alpha 4 Neighboring gene ceramide kinase like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin conjugating enzyme activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-conjugating enzyme E2 E3
    Names
    ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
    XP_038303163.1
    XP_038303164.1
    XP_038319320.1
    XP_038319321.1
    XP_038377240.1
    XP_038377241.1
    XP_038440945.1
    XP_038440946.1
    XP_038440947.1
    XP_038505360.1
    XP_038505361.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051840.1 Reference ROS_Cfam_1.0

      Range
      24364757..24450910
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038447235.1 → XP_038303163.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K0V2, A0A8I3PR80, A0A8P0SYU0
      Related
      ENSCAFP00845037341.1, ENSCAFT00845047586.1
      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    2. XM_038447236.1 → XP_038303164.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K0V2, A0A8I3PR80, A0A8P0SYU0
      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049296.1 Alternate UMICH_Zoey_3.1

      Range
      24454603..24540580
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038521312.1 → XP_038377240.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    2. XM_038521313.1 → XP_038377241.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049777.1 Alternate UNSW_CanFamBas_1.0

      Range
      24419433..24505500
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038649432.1 → XP_038505360.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    2. XM_038649433.1 → XP_038505361.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049257.1 Alternate UU_Cfam_GSD_1.0

      Range
      24552821..24640159
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038585017.1 → XP_038440945.1  ubiquitin-conjugating enzyme E2 E3 isoform X2

    2. XM_038585018.1 → XP_038440946.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K0V2, A0A8I3PR80, A0A8P0SYU0
      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    3. XM_038585019.1 → XP_038440947.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K0V2, A0A8I3PR80, A0A8P0SYU0
      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006618.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      24219719..24305729
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038463392.1 → XP_038319320.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K0V2, A0A8I3PR80, A0A8P0SYU0
      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    2. XM_038463393.1 → XP_038319321.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K0V2, A0A8I3PR80, A0A8P0SYU0
      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme
    Nucleotide Protein
    Heading Accession and Version

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