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    SLC38A5 solute carrier family 38 member 5 [ Canis lupus familiaris (dog) ]

    Gene ID: 612527, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC38A5provided by VGNC
    Official Full Name
    solute carrier family 38 member 5provided by VGNC
    Primary source
    VGNC:VGNC:54601
    See related
    Ensembl:ENSCAFG00845030709
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SLC38A5 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (41845558..41854816, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (16085681..16094898, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (41914395..41923619, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (41832556..41841772, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (41820836..41830050, complement)

    Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RNF138-like Neighboring gene putative protein SSX6 Neighboring gene FtsJ RNA 2'-O-methyltransferase 1 Neighboring gene porcupine O-acyltransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-glutamine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glycine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-histidine transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glutamine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in serine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium-coupled neutral amino acid transporter 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051843.1 Reference ROS_Cfam_1.0

      Range
      41845558..41854816 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038449931.1 → XP_038305859.1  sodium-coupled neutral amino acid transporter 5

      UniProtKB/TrEMBL
      A0A8C0LB41, A0A8C0MWA7, A0A8C0T7F2, A0A8I3S7R6
      Related
      ENSCAFP00845042852.1, ENSCAFT00845054516.1
      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. XM_038449933.1 → XP_038305861.1  sodium-coupled neutral amino acid transporter 5

      UniProtKB/TrEMBL
      A0A8C0LB41, A0A8C0MWA7, A0A8C0T7F2, A0A8I3S7R6
      Related
      ENSCAFP00845042866.1, ENSCAFT00845054531.1
      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_038449932.1 → XP_038305860.1  sodium-coupled neutral amino acid transporter 5

      UniProtKB/TrEMBL
      A0A8C0LB41, A0A8C0MWA7, A0A8C0T7F2, A0A8I3S7R6
      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049299.1 Alternate UMICH_Zoey_3.1

      Range
      41832556..41841772 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038523369.1 → XP_038379297.1  sodium-coupled neutral amino acid transporter 5

      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. XM_038523371.1 → XP_038379299.1  sodium-coupled neutral amino acid transporter 5

      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_038523370.1 → XP_038379298.1  sodium-coupled neutral amino acid transporter 5

      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

      Range
      41820836..41830050 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038651853.1 → XP_038507781.1  sodium-coupled neutral amino acid transporter 5

      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. XM_038651855.1 → XP_038507783.1  sodium-coupled neutral amino acid transporter 5

      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_038651854.1 → XP_038507782.1  sodium-coupled neutral amino acid transporter 5

      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

      Range
      41914395..41923619 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038587337.1 → XP_038443265.1  sodium-coupled neutral amino acid transporter 5

      UniProtKB/TrEMBL
      A0A8C0LB41, A0A8C0MWA7, A0A8C0T7F2, A0A8I3S7R6
      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. XM_038587339.1 → XP_038443267.1  sodium-coupled neutral amino acid transporter 5

      UniProtKB/TrEMBL
      A0A8C0LB41, A0A8C0MWA7, A0A8C0T7F2, A0A8I3S7R6
      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_038587338.1 → XP_038443266.1  sodium-coupled neutral amino acid transporter 5

      UniProtKB/TrEMBL
      A0A8C0LB41, A0A8C0MWA7, A0A8C0T7F2, A0A8I3S7R6
      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      16085681..16094898 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038464932.1 → XP_038320860.1  sodium-coupled neutral amino acid transporter 5

      UniProtKB/TrEMBL
      A0A8C0LB41, A0A8C0MWA7, A0A8C0T7F2, A0A8I3S7R6
      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. XM_038464934.1 → XP_038320862.1  sodium-coupled neutral amino acid transporter 5

      UniProtKB/TrEMBL
      A0A8C0LB41, A0A8C0MWA7, A0A8C0T7F2, A0A8I3S7R6
      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_038464933.1 → XP_038320861.1  sodium-coupled neutral amino acid transporter 5

      UniProtKB/TrEMBL
      A0A8C0LB41, A0A8C0MWA7, A0A8C0T7F2, A0A8I3S7R6
      Conserved Domains (1) summary
      cl00456
      Location:46 → 459
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version

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