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    RARRES1 retinoic acid receptor responder 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 612298, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RARRES1provided by VGNC
    Official Full Name
    retinoic acid receptor responder 1provided by VGNC
    Primary source
    VGNC:VGNC:45354
    See related
    Ensembl:ENSCAFG00845025008
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See RARRES1 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 23 NC_051827.1 (52633371..52670234, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 23 NC_006605.4 (51802164..51839289, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 23 NC_049244.1 (52552128..52590336, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 23 NC_049283.1 (52213632..52251296, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 23 NC_049764.1 (52266803..52304934, complement)

    Chromosome 23 - NC_051827.1Genomic Context describing neighboring genes Neighboring gene myeloid leukemia factor 1 Neighboring gene G elongation factor mitochondrial 1 Neighboring gene latexin Neighboring gene uncharacterized LOC102157385 Neighboring gene U4 spliceosomal RNA Neighboring gene OPA1 mitochondrial dynamin like GTPase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: retinoic acid receptor responder protein 1; retinoic acid receptor responder protein 1
    Names
    retinoic acid receptor responder (tazarotene induced) 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051827.1 Reference ROS_Cfam_1.0

      Range
      52633371..52670234 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038431621.1 → XP_038287549.1  retinoic acid receptor responder protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QWS9, A0A8I3PSZ2
      Related
      ENSCAFP00845034582.1, ENSCAFT00845044134.1
      Conserved Domains (1) summary
      pfam06907
      Location:60 → 272
      Latexin

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049283.1 Alternate UMICH_Zoey_3.1

      Range
      52213632..52251296 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038506994.1 → XP_038362922.1  retinoic acid receptor responder protein 1 isoform X2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049764.1 Alternate UNSW_CanFamBas_1.0

      Range
      52266803..52304934 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038634364.1 → XP_038490292.1  LOW QUALITY PROTEIN: retinoic acid receptor responder protein 1 isoform X1

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049244.1 Alternate UU_Cfam_GSD_1.0

      Range
      52552128..52590336 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038570208.1 → XP_038426136.1  retinoic acid receptor responder protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0QWS9

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006605.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      51802164..51839289 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038456993.1 → XP_038312921.1  retinoic acid receptor responder protein 1 isoform X4

      Conserved Domains (1) summary
      pfam06907
      Location:9 → 126
      Latexin
    Nucleotide Protein
    Heading Accession and Version

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