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    PPP1R13L protein phosphatase 1 regulatory subunit 13 like [ Canis lupus familiaris (dog) ]

    Gene ID: 612286, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PPP1R13Lprovided by VGNC
    Official Full Name
    protein phosphatase 1 regulatory subunit 13 likeprovided by VGNC
    Primary source
    VGNC:VGNC:44882
    See related
    Ensembl:ENSCAFG00845005302
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See PPP1R13L in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (110682231..110698908)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (109633886..109650563)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (110861328..110878230)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (110357858..110374530)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (109992017..110008687)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene FosB proto-oncogene, AP-1 transcription factor subunit Neighboring gene ERCC excision repair 1, endonuclease non-catalytic subunit Neighboring gene RNA polymerase I subunit G Neighboring gene V-type proton ATPase subunit G 1-like Neighboring gene ERCC excision repair 2, TFIIH core complex helicase subunit Neighboring gene kinesin light chain 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Light-activated BioID - an optically activated proximity labeling system to study protein-protein interactions. Shafraz O, et al. J Cell Sci, 2023 Oct 1. PMID 37756605, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    relA-associated inhibitor

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      110682231..110698908
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038656653.1 → XP_038512581.1  relA-associated inhibitor isoform X1

      UniProtKB/TrEMBL
      A0A8C0M6V3, A0A8I3MSU4
      Conserved Domains (4) summary
      cd11952
      Location:776 → 832
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:54 → 524
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:646 → 672
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:646 → 732
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038656655.1 → XP_038512583.1  relA-associated inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A8C0KE25, A0A8C0S2P0, A0A8C0YSN2, A0A8I3MWM8
      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_038656652.1 → XP_038512580.1  relA-associated inhibitor isoform X1

      UniProtKB/TrEMBL
      A0A8C0M6V3, A0A8I3MSU4
      Related
      ENSCAFP00845007391.1, ENSCAFT00845009445.1
      Conserved Domains (4) summary
      cd11952
      Location:776 → 832
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:54 → 524
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:646 → 672
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:646 → 732
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_038656654.1 → XP_038512582.1  relA-associated inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A8C0KE25, A0A8C0S2P0, A0A8C0YSN2, A0A8I3MWM8
      Related
      ENSCAFP00845007402.1, ENSCAFT00845009464.1
      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_038656656.1 → XP_038512584.1  relA-associated inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A8C0KE25, A0A8C0S2P0, A0A8C0YSN2, A0A8I3MWM8
      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      110357858..110374530
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038467851.1 → XP_038323779.1  relA-associated inhibitor isoform X1

      Conserved Domains (4) summary
      cd11952
      Location:776 → 832
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:54 → 524
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:646 → 672
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:646 → 732
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038467853.1 → XP_038323781.1  relA-associated inhibitor isoform X2

      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_038467849.1 → XP_038323777.1  relA-associated inhibitor isoform X1

      Conserved Domains (4) summary
      cd11952
      Location:776 → 832
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:54 → 524
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:646 → 672
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:646 → 732
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_038467852.1 → XP_038323780.1  relA-associated inhibitor isoform X2

      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_038467854.1 → XP_038323782.1  relA-associated inhibitor isoform X2

      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      109992017..110008687
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038592851.1 → XP_038448779.1  relA-associated inhibitor isoform X1

      Conserved Domains (4) summary
      cd11952
      Location:776 → 832
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:54 → 524
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:646 → 672
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:646 → 732
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038592853.1 → XP_038448781.1  relA-associated inhibitor isoform X2

      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_038592850.1 → XP_038448778.1  relA-associated inhibitor isoform X1

      Conserved Domains (4) summary
      cd11952
      Location:776 → 832
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:54 → 524
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:646 → 672
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:646 → 732
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_038592852.1 → XP_038448780.1  relA-associated inhibitor isoform X2

      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_038592854.1 → XP_038448782.1  relA-associated inhibitor isoform X2

      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      110861328..110878230
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038528572.1 → XP_038384500.1  relA-associated inhibitor isoform X1

      UniProtKB/TrEMBL
      A0A8C0M6V3, A0A8I3MSU4
      Conserved Domains (4) summary
      cd11952
      Location:776 → 832
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:54 → 524
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:646 → 672
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:646 → 732
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038528574.1 → XP_038384502.1  relA-associated inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A8C0KE25, A0A8C0S2P0, A0A8C0YSN2, A0A8I3MWM8
      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_038528571.1 → XP_038384499.1  relA-associated inhibitor isoform X1

      UniProtKB/TrEMBL
      A0A8C0M6V3, A0A8I3MSU4
      Conserved Domains (4) summary
      cd11952
      Location:776 → 832
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:54 → 524
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:646 → 672
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:646 → 732
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_038528573.1 → XP_038384501.1  relA-associated inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A8C0KE25, A0A8C0S2P0, A0A8C0YSN2, A0A8I3MWM8
      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_038528575.1 → XP_038384503.1  relA-associated inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A8C0KE25, A0A8C0S2P0, A0A8C0YSN2, A0A8I3MWM8
      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      109633886..109650563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014119710.3 → XP_013975185.2  relA-associated inhibitor isoform X1

      UniProtKB/TrEMBL
      A0A8C0M6V3, A0A8I3MSU4
      Conserved Domains (4) summary
      cd11952
      Location:776 → 832
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:54 → 524
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:646 → 672
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:646 → 732
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038426434.1 → XP_038282362.1  relA-associated inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A8C0KE25, A0A8C0S2P0, A0A8C0YSN2, A0A8I3MWM8
      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_038426289.1 → XP_038282217.1  relA-associated inhibitor isoform X1

      UniProtKB/TrEMBL
      A0A8C0M6V3, A0A8I3MSU4
      Conserved Domains (4) summary
      cd11952
      Location:776 → 832
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:54 → 524
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:646 → 672
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:646 → 732
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_038426367.1 → XP_038282295.1  relA-associated inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A8C0KE25, A0A8C0S2P0, A0A8C0YSN2, A0A8I3MWM8
      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_038426480.1 → XP_038282408.1  relA-associated inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A8C0KE25, A0A8C0S2P0, A0A8C0YSN2, A0A8I3MWM8
      Conserved Domains (4) summary
      cd11952
      Location:768 → 824
      SH3_iASPP; Src Homology 3 (SH3) domain of Inhibitor of ASPP protein (iASPP)
      PHA03247
      Location:46 → 516
      PHA03247; large tegument protein UL36; Provisional
      sd00045
      Location:638 → 664
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:638 → 724
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
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