U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    HMX3 H6 family homeobox 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 611245, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    HMX3provided by VGNC
    Official Full Name
    H6 family homeobox 3provided by VGNC
    Primary source
    VGNC:VGNC:49908
    See related
    Ensembl:ENSCAFG00845024473
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See HMX3 in Genome Data Viewer
    Location:
    chromosome: 28
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 28 NC_051832.1 (33230145..33231847)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 28 NC_006610.4 (32738924..32740626)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 28 NC_049249.1 (33029307..33031009)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 28 NC_049288.1 (32787275..32788976)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 28 NC_049769.1 (32779432..32781134)

    Chromosome 28 - NC_051832.1Genomic Context describing neighboring genes Neighboring gene IKAROS family zinc finger 5 Neighboring gene acyl-CoA dehydrogenase short/branched chain Neighboring gene uncharacterized LOC111093056 Neighboring gene H6 family homeobox 2 Neighboring gene BUB3 mitotic checkpoint protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    homeobox protein HMX3
    Names
    homeobox (H6 family) 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051832.1 Reference ROS_Cfam_1.0

      Range
      33230145..33231847
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038439691.1 → XP_038295619.1  homeobox protein HMX3

      UniProtKB/TrEMBL
      A0A8C0KS87, A0A8C0NYY0, A0A8I3PLU9
      Related
      ENSCAFP00845033881.1, ENSCAFT00845043217.1
      Conserved Domains (1) summary
      pfam00046
      Location:231 → 285
      Homeobox; Homeobox domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049288.1 Alternate UMICH_Zoey_3.1

      Range
      32787275..32788976
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038515672.1 → XP_038371600.1  homeobox protein HMX3

      Conserved Domains (1) summary
      pfam00046
      Location:231 → 285
      Homeobox; Homeobox domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049769.1 Alternate UNSW_CanFamBas_1.0

      Range
      32779432..32781134
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038642148.1 → XP_038498076.1  homeobox protein HMX3

      Conserved Domains (1) summary
      pfam00046
      Location:231 → 285
      Homeobox; Homeobox domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049249.1 Alternate UU_Cfam_GSD_1.0

      Range
      33029307..33031009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577968.1 → XP_038433896.1  homeobox protein HMX3

      UniProtKB/TrEMBL
      A0A8C0KS87, A0A8C0NYY0, A0A8I3PLU9
      Conserved Domains (1) summary
      pfam00046
      Location:231 → 285
      Homeobox; Homeobox domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      32738924..32740626
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022411819.2 → XP_022267527.2  homeobox protein HMX3

      UniProtKB/TrEMBL
      A0A8C0KS87, A0A8C0NYY0, A0A8I3PLU9
      Conserved Domains (1) summary
      pfam00046
      Location:231 → 285
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials