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    MRM1 mitochondrial rRNA methyltransferase 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 610311, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MRM1provided by VGNC
    Official Full Name
    mitochondrial rRNA methyltransferase 1provided by VGNC
    Primary source
    VGNC:VGNC:43366
    See related
    Ensembl:ENSCAFG00845029022
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See MRM1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (37284304..37290772)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (35700609..35707086)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (36441466..36447933)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (36066771..36073238)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (36353479..36357824)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene gametogenetin binding protein 2 Neighboring gene dehydrogenase/reductase 11 Neighboring gene uncharacterized LOC111097545 Neighboring gene uncharacterized LOC111097546

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rRNA methyltransferase 1, mitochondrial
    Names
    mitochondrial rRNA methyltransferase 1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      37284304..37290772
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038677240.1 → XP_038533168.1  rRNA methyltransferase 1, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0PZP5, A0A8I3Q638
      Related
      ENSCAFP00845040270.1, ENSCAFT00845051334.1
      Conserved Domains (2) summary
      cd18105
      Location:148 → 303
      SpoU-like_MRM1; SAM-dependent rRNA methylase related to MRM1
      pfam08032
      Location:81 → 129
      SpoU_sub_bind; RNA 2'-O ribose methyltransferase substrate binding

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      36066771..36073238
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038486208.1 → XP_038342136.1  rRNA methyltransferase 1, mitochondrial

      Conserved Domains (2) summary
      cd18105
      Location:148 → 303
      SpoU-like_MRM1; SAM-dependent rRNA methylase related to MRM1
      pfam08032
      Location:81 → 129
      SpoU_sub_bind; RNA 2'-O ribose methyltransferase substrate binding

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      36353479..36357824
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038611994.1 → XP_038467922.1  rRNA methyltransferase 1, mitochondrial

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      36441466..36447933
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038548026.1 → XP_038403954.1  rRNA methyltransferase 1, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0RSE5, A0A8P0SLQ7

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      35700609..35707086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_847787.6 → XP_852880.3  rRNA methyltransferase 1, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0RSE5, A0A8P0SLQ7
      Conserved Domains (3) summary
      COG0566
      Location:88 → 309
      SpoU; tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]
      pfam00588
      Location:150 → 301
      SpoU_methylase; SpoU rRNA Methylase family
      pfam08032
      Location:81 → 129
      SpoU_sub_bind; RNA 2'-O ribose methyltransferase substrate binding
    Nucleotide Protein
    Heading Accession and Version

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