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    LXN latexin [ Canis lupus familiaris (dog) ]

    Gene ID: 610062, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LXNprovided by VGNC
    Official Full Name
    latexinprovided by VGNC
    Primary source
    VGNC:VGNC:42871
    See related
    Ensembl:ENSCAFG00845024952
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See LXN in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 23 NC_051827.1 (52601679..52609457, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 23 NC_006605.4 (51772677..51778236, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 23 NC_049244.1 (52520422..52528212, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 23 NC_049283.1 (52182014..52189772, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 23 NC_049764.1 (52234990..52242749, complement)

    Chromosome 23 - NC_051827.1Genomic Context describing neighboring genes Neighboring gene arginine and serine rich coiled-coil 1 Neighboring gene uncharacterized LOC119865449 Neighboring gene myeloid leukemia factor 1 Neighboring gene G elongation factor mitochondrial 1 Neighboring gene retinoic acid receptor responder 1 Neighboring gene uncharacterized LOC102157385 Neighboring gene U4 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    latexin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051827.1 Reference ROS_Cfam_1.0

      Range
      52601679..52609457 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038432753.1 → XP_038288681.1  latexin

      UniProtKB/TrEMBL
      A0A8C0P2S3, A0A8I3PT76
      Related
      ENSCAFP00845034517.1, ENSCAFT00845044049.1
      Conserved Domains (1) summary
      pfam06907
      Location:4 → 219
      Latexin

    RNA

    1. XR_005300402.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049283.1 Alternate UMICH_Zoey_3.1

      Range
      52182014..52189772 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038508077.1 → XP_038364005.1  latexin

      Conserved Domains (1) summary
      pfam06907
      Location:4 → 219
      Latexin

    RNA

    1. XR_005343500.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049764.1 Alternate UNSW_CanFamBas_1.0

      Range
      52234990..52242749 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038635509.1 → XP_038491437.1  latexin

      Conserved Domains (1) summary
      pfam06907
      Location:4 → 219
      Latexin

    RNA

    1. XR_005411206.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049244.1 Alternate UU_Cfam_GSD_1.0

      Range
      52520422..52528212 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038571317.1 → XP_038427245.1  latexin

      UniProtKB/TrEMBL
      A0A8C0P2S3, A0A8I3PT76
      Conserved Domains (1) summary
      pfam06907
      Location:4 → 219
      Latexin

    RNA

    1. XR_005377286.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006605.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      51772677..51778236 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_847886.6 → XP_852979.1  latexin

      UniProtKB/TrEMBL
      A0A8C0P2S3, A0A8I3PT76
      Conserved Domains (1) summary
      pfam06907
      Location:4 → 219
      Latexin
    Nucleotide Protein
    Heading Accession and Version

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