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    SLC25A1 solute carrier family 25 member 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 608348, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC25A1provided by VGNC
    Official Full Name
    solute carrier family 25 member 1provided by VGNC
    Primary source
    VGNC:VGNC:46290
    See related
    Ensembl:ENSCAFG00845030106
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SLC25A1 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (31403987..31407864)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (29956809..29960686)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (30164721..30168599)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (29452587..29456464)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (29076886..29080763)

    Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene clathrin heavy chain like 1 Neighboring gene goosecoid homeobox 2 Neighboring gene ess-2 splicing factor homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mitochondrial citrate transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tricarboxylate transport protein, mitochondrial; LOW QUALITY PROTEIN: tricarboxylate transport protein, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051830.1 Reference ROS_Cfam_1.0

      Range
      31403987..31407864
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038437545.1 → XP_038293473.1  tricarboxylate transport protein, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0KE39, A0A8C0P467, A0A8I3Q9J5
      Related
      ENSCAFP00845041924.1, ENSCAFT00845053367.1
      Conserved Domains (1) summary
      pfam00153
      Location:21 → 111
      Mito_carr; Mitochondrial carrier protein

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049286.1 Alternate UMICH_Zoey_3.1

      Range
      29452587..29456464
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038512408.1 → XP_038368336.1  tricarboxylate transport protein, mitochondrial

      Conserved Domains (1) summary
      pfam00153
      Location:21 → 111
      Mito_carr; Mitochondrial carrier protein

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

      Range
      29076886..29080763
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640121.1 → XP_038496049.1  tricarboxylate transport protein, mitochondrial

      Conserved Domains (1) summary
      pfam00153
      Location:21 → 111
      Mito_carr; Mitochondrial carrier protein

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

      Range
      30164721..30168599
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038575909.1 → XP_038431837.1  LOW QUALITY PROTEIN: tricarboxylate transport protein, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0KE39, A0A8C0P467, A0A8I3Q9J5
      Conserved Domains (1) summary
      pfam00153
      Location:21 → 111
      Mito_carr; Mitochondrial carrier protein

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      29956809..29960686
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_845348.6 → XP_850441.2  tricarboxylate transport protein, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0KE39, A0A8C0P467, A0A8I3Q9J5
      Conserved Domains (1) summary
      pfam00153
      Location:21 → 111
      Mito_carr; Mitochondrial carrier protein
    Nucleotide Protein
    Heading Accession and Version

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