HCRT hypocretin neuropeptide precursor [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: HCRTprovided by VGNC
Official Full Name: hypocretin neuropeptide precursorprovided by VGNC
Primary source: VGNC:VGNC:41622
See related: Ensembl:ENSCAFG00845010112
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 9

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	9	NC_051813.1 (21448985..21450877)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	9	NC_006591.4 (20191816..20193065)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	9	NC_049230.1 (20605051..20606300)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	9	NC_049269.1 (20234894..20236143)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	9	NC_049750.1 (20501999..20503248)

Chromosome 9 - NC_051813.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

The presence of orexin A in the ovary either in dog or in cat is in agreement with previous data on the presence and role of orexins in the female genital system of other species.
Title: Orexin A expression in the ovary of dog and cat.

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General gene information

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Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in feeding behavior	IEA Inferred from Electronic Annotation more info	PubMed
involved_in neuropeptide signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: hypocretin neuropeptide precursor; orexin

Names: prepro-orexin; preprohypocretin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001033994.1 → NP_001029166.1 hypocretin neuropeptide precursor precursor

See identical proteins and their annotated locations for NP_001029166.1

Status: PROVISIONAL

Source sequence(s)

AF285110

UniProtKB/Swiss-Prot

Q9GLF6

UniProtKB/TrEMBL

A0A8C0KK24

Related

ENSCAFP00845013852.1, ENSCAFT00845017785.1

Conserved Domains (1) summary

pfam02072
Location:1 → 129

Orexin; Prepro-orexin

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051813.1 Reference ROS_Cfam_1.0

Range

21448985..21450877

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038675094.1 → XP_038531022.1 orexin isoform X1

UniProtKB/Swiss-Prot

Q9GLF6

UniProtKB/TrEMBL

A0A8C0KK24

Conserved Domains (1) summary

pfam02072
Location:1 → 129

Orexin; Prepro-orexin