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    NSUN3 NOP2/Sun RNA methyltransferase 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 607320, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NSUN3provided by VGNC
    Official Full Name
    NOP2/Sun RNA methyltransferase 3provided by VGNC
    Primary source
    VGNC:VGNC:43991
    See related
    Ensembl:ENSCAFG00845030646
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See NSUN3 in Genome Data Viewer
    Location:
    chromosome: 33
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 33 NC_051837.1 (1873915..1929118)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 33 NC_006615.4 (1954043..2009176)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 33 NC_049254.1 (2042811..2097960)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 33 NC_049293.1 (1782555..1837657)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 33 NC_049774.1 (1817903..1873015)

    Chromosome 33 - NC_051837.1Genomic Context describing neighboring genes Neighboring gene protein S Neighboring gene ADP ribosylation factor like GTPase 13B Neighboring gene syntaxin 19 Neighboring gene ubiquitin-conjugating enzyme E2 N-like Neighboring gene uncharacterized LOC111093819 Neighboring gene translation initiation factor IF-2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial
    Names
    NOL1/NOP2/Sun domain family, member 3
    NOP2/Sun RNA methyltransferase family member 3
    XP_022269768.1
    XP_022269769.1
    XP_038300582.1
    XP_038300583.1
    XP_038300584.1
    XP_038374922.1
    XP_038374923.1
    XP_038374924.1
    XP_038438438.1
    XP_038438439.1
    XP_038438440.1
    XP_038502866.1
    XP_038502867.1
    XP_038502868.1
    XP_849037.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051837.1 Reference ROS_Cfam_1.0

      Range
      1873915..1929118
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038444654.1 → XP_038300582.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8C0NWZ8, A0A8I3SCR6
      Related
      ENSCAFP00845042730.1, ENSCAFT00845054380.1
      Conserved Domains (1) summary
      COG0144
      Location:112 → 333
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    2. XM_038444655.1 → XP_038300583.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X2

      Conserved Domains (1) summary
      COG0144
      Location:112 → 249
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    3. XM_038444656.1 → XP_038300584.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X3

      Conserved Domains (1) summary
      COG0144
      Location:77 → 298
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049293.1 Alternate UMICH_Zoey_3.1

      Range
      1782555..1837657
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038518994.1 → XP_038374922.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X1

      Conserved Domains (1) summary
      COG0144
      Location:112 → 333
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    2. XM_038518995.1 → XP_038374923.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X2

      Conserved Domains (1) summary
      COG0144
      Location:112 → 249
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    3. XM_038518996.1 → XP_038374924.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X3

      Conserved Domains (1) summary
      COG0144
      Location:77 → 298
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049774.1 Alternate UNSW_CanFamBas_1.0

      Range
      1817903..1873015
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038646938.1 → XP_038502866.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X1

      Conserved Domains (1) summary
      COG0144
      Location:112 → 333
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    2. XM_038646939.1 → XP_038502867.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X2

      Conserved Domains (1) summary
      COG0144
      Location:112 → 249
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    3. XM_038646940.1 → XP_038502868.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X3

      Conserved Domains (1) summary
      COG0144
      Location:77 → 298
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049254.1 Alternate UU_Cfam_GSD_1.0

      Range
      2042811..2097960
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038582510.1 → XP_038438438.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8C0NWZ8, A0A8I3SCR6
      Conserved Domains (1) summary
      COG0144
      Location:112 → 333
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    2. XM_038582511.1 → XP_038438439.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X2

      Conserved Domains (1) summary
      COG0144
      Location:112 → 249
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    3. XM_038582512.1 → XP_038438440.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X3

      Conserved Domains (1) summary
      COG0144
      Location:77 → 298
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006615.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      1954043..2009176
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_843944.6 → XP_849037.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8C0NWZ8, A0A8I3SCR6
      Conserved Domains (1) summary
      COG0144
      Location:112 → 333
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    2. XM_022414060.2 → XP_022269768.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X2

      Conserved Domains (1) summary
      COG0144
      Location:112 → 249
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    3. XM_022414061.2 → XP_022269769.1  tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X3

      Conserved Domains (1) summary
      COG0144
      Location:77 → 298
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
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