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    DPPA2 developmental pluripotency associated 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 607166, updated on 5-Mar-2024

    Summary

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    Gene symbol
    DPPA2
    Gene description
    developmental pluripotency associated 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See DPPA2 in Genome Data Viewer
    Location:
    chromosome: 33
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 33 NC_051837.1 (14625561..14633457, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 33 NC_006615.4 (14562076..14569671, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 33 NC_049254.1 (15038392..15046091, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 33 NC_049293.1 (14494292..14502154, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 33 NC_049774.1 (14561153..14568840, complement)

    Chromosome 33 - NC_051837.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119867295 Neighboring gene uncharacterized LOC102155445 Neighboring gene developmental pluripotency associated 4 Neighboring gene uncharacterized LOC111093802

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    developmental pluripotency-associated protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051837.1 Reference ROS_Cfam_1.0

      Range
      14625561..14633457 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038445368.1 → XP_038301296.1  developmental pluripotency-associated protein 2

      UniProtKB/TrEMBL
      A0A8C0RQW7, A0A8I3Q0I7
      Conserved Domains (3) summary
      pfam14047
      Location:242 → 307
      DCR; Dppa2/4 conserved region
      pfam14049
      Location:155 → 237
      Dppa2_A; Dppa2/4 conserved region in higher vertebrates
      cl02640
      Location:122 → 147
      SAP; SAP domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049293.1 Alternate UMICH_Zoey_3.1

      Range
      14494292..14502154 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038519630.1 → XP_038375558.1  developmental pluripotency-associated protein 2

      Conserved Domains (3) summary
      pfam14047
      Location:242 → 307
      DCR; Dppa2/4 conserved region
      pfam14049
      Location:155 → 237
      Dppa2_A; Dppa2/4 conserved region in higher vertebrates
      cl02640
      Location:122 → 147
      SAP; SAP domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049774.1 Alternate UNSW_CanFamBas_1.0

      Range
      14561153..14568840 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038647656.1 → XP_038503584.1  developmental pluripotency-associated protein 2

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049254.1 Alternate UU_Cfam_GSD_1.0

      Range
      15038392..15046091 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038583252.1 → XP_038439180.1  developmental pluripotency-associated protein 2

      UniProtKB/TrEMBL
      A0A8C0RQW7, A0A8I3Q0I7
      Conserved Domains (3) summary
      pfam14047
      Location:242 → 307
      DCR; Dppa2/4 conserved region
      pfam14049
      Location:155 → 237
      Dppa2_A; Dppa2/4 conserved region in higher vertebrates
      cl02640
      Location:122 → 147
      SAP; SAP domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006615.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      14562076..14569671 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038462514.1 → XP_038318442.1  developmental pluripotency-associated protein 2

      UniProtKB/TrEMBL
      A0A8C0RQW7, A0A8I3Q0I7
      Conserved Domains (3) summary
      pfam14047
      Location:242 → 307
      DCR; Dppa2/4 conserved region
      pfam14049
      Location:155 → 237
      Dppa2_A; Dppa2/4 conserved region in higher vertebrates
      cl02640
      Location:122 → 147
      SAP; SAP domain
    Nucleotide Protein
    Heading Accession and Version

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