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    ARF4 ADP ribosylation factor 4 [ Canis lupus familiaris (dog) ]

    Gene ID: 607073, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ARF4provided by VGNC
    Official Full Name
    ADP ribosylation factor 4provided by VGNC
    Primary source
    VGNC:VGNC:38030
    See related
    Ensembl:ENSCAFG00845021882
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ARF4 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (33122306..33143713)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (32777874..32799283)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (33106867..33128487)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (32578184..32599566)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (32936246..32957656)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene DENN domain containing 6A Neighboring gene uncharacterized LOC111091306 Neighboring gene pygopus homolog 2-like Neighboring gene centromere protein H-like Neighboring gene proline-rich protein 13-like Neighboring gene phosphodiesterase 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor 4
    XP_038283348.1
    XP_038359064.1
    XP_038422030.1
    XP_038486174.1
    XP_849047.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      33122306..33143713
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038427420.1 → XP_038283348.1  ADP-ribosylation factor 4

      UniProtKB/TrEMBL
      A0A8C0K0E0, A0A8C0PK84, A0A8I3P9A6, A0A8I3PMI1
      Related
      ENSCAFP00845030293.1, ENSCAFT00845038689.1
      Conserved Domains (1) summary
      cl40481
      Location:1 → 180
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      32578184..32599566
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038503136.1 → XP_038359064.1  ADP-ribosylation factor 4

      Conserved Domains (1) summary
      cl40481
      Location:1 → 180
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      32936246..32957656
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038630246.1 → XP_038486174.1  ADP-ribosylation factor 4

      Conserved Domains (1) summary
      cl40481
      Location:1 → 180
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      33106867..33128487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038566102.1 → XP_038422030.1  ADP-ribosylation factor 4

      UniProtKB/TrEMBL
      A0A8C0K0E0, A0A8C0PK84, A0A8I3P9A6, A0A8I3PMI1
      Conserved Domains (1) summary
      cl40481
      Location:1 → 180
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      32777874..32799283
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_843954.6 → XP_849047.1  ADP-ribosylation factor 4

      See identical proteins and their annotated locations for XP_849047.1

      UniProtKB/TrEMBL
      A0A8C0K0E0, A0A8C0PK84, A0A8I3P9A6, A0A8I3PMI1
      Conserved Domains (1) summary
      cl40481
      Location:1 → 180
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases
    Nucleotide Protein
    Heading Accession and Version

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