Acrv1 acrosomal vesicle protein 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Acrv1provided by RGD
Official Full Name: acrosomal vesicle protein 1provided by RGD
Primary source: RGD:620153
See related: EnsemblRapid:ENSRNOG00000008508 AllianceGenome:RGD:620153
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Sp10
Summary: Predicted to be located in acrosomal vesicle. Orthologous to human ACRV1 (acrosomal vesicle protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Restricted expression toward (RPKM 290.6) See more
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Genomic context

Location:: 8q22

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	8	NC_086026.1 (44593246..44598823)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	8	NC_051343.1 (36404394..36409971)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	8	NC_005107.4 (39164991..39170568)

Chromosome 8 - NC_086026.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Component	Evidence Code	Pubs
located_in acrosomal vesicle	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: acrosomal protein SP-10

Names: sperm protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_021747.1 → NP_068515.1 acrosomal protein SP-10 precursor

See identical proteins and their annotated locations for NP_068515.1

Status: PROVISIONAL

Source sequence(s)

AJ243484

UniProtKB/TrEMBL

A0A8I6A9C9, A6KRN3, F7FIQ9, Q9WUY6

Related

ENSRNOP00000011309.1, ENSRNOT00000011309.5

Conserved Domains (1) summary

cd00117
Location:191 → 267

LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...