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    p3h4 prolyl 3-hydroxylase family member 4 (non-enzymatic) [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 595018, updated on 17-Aug-2024

    Summary

    Official Symbol
    p3h4provided by Xenbase
    Official Full Name
    prolyl 3-hydroxylase family member 4 (non-enzymatic)provided by Xenbase
    Primary source
    Xenbase:XB-GENE-1007100
    See related
    Ensembl:ENSXETG00000002284
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    no55; sc65; nol55; leprel4
    Orthologs
    NEW
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    Genomic context

    See p3h4 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (7329839..7341628)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (2090417..2102099, complement)

    Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene 5'-nucleotidase, cytosolic IIIB Neighboring gene FKBP prolyl isomerase 10 Neighboring gene junction plakoglobin Neighboring gene huntingtin-associated protein 1

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    endoplasmic reticulum protein SC65
    Names
    leprecan-like 4
    synaptonemal complex protein SC65

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030459.1NP_001025630.1  endoplasmic reticulum protein SC65 precursor

      See identical proteins and their annotated locations for NP_001025630.1

      Status: PROVISIONAL

      Source sequence(s)
      BC091581
      UniProtKB/TrEMBL
      F7DFD4, Q5BJ86
      Related
      ENSXETP00000004875.3, ENSXETT00000004875.5

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      7329839..7341628
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)