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    zcchc24 zinc finger, CCHC domain containing 24 [ Danio rerio (zebrafish) ]

    Gene ID: 562028, updated on 12-Sep-2024

    Summary

    Official Symbol
    zcchc24provided by ZNC
    Official Full Name
    zinc finger, CCHC domain containing 24provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-3573
    See related
    Ensembl:ENSDARG00000078026 AllianceGenome:ZFIN:ZDB-GENE-030131-3573
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fc45d05; wu:fc45d05; zgc:158323
    Summary
    Predicted to enable nucleic acid binding activity and zinc ion binding activity. Orthologous to human ZCCHC24 (zinc finger CCHC-type containing 24). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See zcchc24 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (30579260..30645965, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (30448810..30515515, complement)

    Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene zinc finger, MIZ-type containing 1a Neighboring gene peptidylprolyl isomerase Fa Neighboring gene uncharacterized LOC137487412 Neighboring gene wu:fj13e08 Neighboring gene polyamine oxidase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    zinc finger CCHC domain-containing protein 24

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001098388.2NP_001091858.1  zinc finger CCHC domain-containing protein 24

      See identical proteins and their annotated locations for NP_001091858.1

      Status: VALIDATED

      Source sequence(s)
      AL844152, CT025887, CT621901
      UniProtKB/TrEMBL
      A0A8M1NES5, A5D8K9
      Related
      ENSDARP00000103116.3, ENSDART00000109307.4
      Conserved Domains (2) summary
      pfam13696
      Location:128146
      zf-CCHC_2; Zinc knuckle
      pfam17180
      Location:161227
      zf-3CxxC_2; Zinc-binding domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007124.7 Reference GRCz11 Primary Assembly

      Range
      30579260..30645965 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)