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    tcaim T cell activation inhibitor, mitochondrial [ Danio rerio (zebrafish) ]

    Gene ID: 559258, updated on 2-Nov-2024

    Summary

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    Official Symbol
    tcaimprovided by ZNC
    Official Full Name
    T cell activation inhibitor, mitochondrialprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-160113-67
    See related
    Ensembl:ENSDARG00000079881 AllianceGenome:ZFIN:ZDB-GENE-160113-67
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Orthologous to human TCAIM (T cell activation inhibitor, mitochondrial). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See tcaim in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (7802730..7828850, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (7887894..7911577, complement)

    Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene CCR4-NOT transcription complex, subunit 10 Neighboring gene tripartite motif containing 71, E3 ubiquitin protein ligase Neighboring gene microRNA mir-138-2 Neighboring gene uncharacterized LOC137487833

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Evolution of complexity in the zebrafish synapse proteome. Bayés À, et al. Nat Commun, 2017 Mar 2. PMID 28252024, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    T-cell activation inhibitor, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007127.7 Reference GRCz11 Primary Assembly

      Range
      7802730..7828850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_682578.7 → XP_687670.2  T-cell activation inhibitor, mitochondrial

      UniProtKB/TrEMBL
      A0A8N7T6T6, F1QHT7
      Related
      ENSDARP00000102984.3, ENSDART00000108653.5
      Conserved Domains (2) summary
      pfam14687
      Location:23 → 127
      DUF4460; Domain of unknown function (DUF4460)
      pfam14688
      Location:189 → 489
      DUF4461; Domain of unknown function (DUF4461)
    Nucleotide Protein Strain
    Heading Accession and Version

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