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    slc2a15b solute carrier family 2 member 15b [ Danio rerio (zebrafish) ]

    Gene ID: 552924, updated on 12-Sep-2024

    Summary

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    Official Symbol
    slc2a15bprovided by ZNC
    Official Full Name
    solute carrier family 2 member 15bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050508-1
    See related
    Ensembl:ENSDARG00000053269 AllianceGenome:ZFIN:ZDB-GENE-050508-1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:113085
    Summary
    Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within carbohydrate transport and transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including heart; integument; kidney; liver; and muscle. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See slc2a15b in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (31573245..31598417)
    105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (30789322..30865999)

    Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110439710 Neighboring gene ladybird homeobox 1b Neighboring gene fibroblast growth factor 8b Neighboring gene deleted in primary ciliary dyskinesia homolog (mouse)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. The Vital Dye CDr10b Labels the Zebrafish Mid-Intestine and Lumen. Sander V, et al. Molecules, 2017 Mar 13. PMID 28335401, Free PMC Article
    2. Leucophores are similar to xanthophores in their specification and differentiation processes in medaka. Kimura T, et al. Proc Natl Acad Sci U S A, 2014 May 20. PMID 24803434, Free PMC Article
    3. Specific expression and regulation of glucose transporters in zebrafish ionocytes. Tseng YC, et al. Am J Physiol Regul Integr Comp Physiol, 2009 Aug. PMID 19458281
    4. Fate plasticity and reprogramming in genetically distinct populations of Danio leucophores. Lewis VM, et al. Proc Natl Acad Sci U S A, 2019 Jun 11. PMID 31138706, Free PMC Article
    5. Single-cell RNA analysis identifies pre-migratory neural crest cells expressing markers of differentiated derivatives. Lencer E, et al. Elife, 2021 Aug 16. PMID 34397384, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables hexose transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in monosaccharide transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    solute carrier family 2 member 15b
    Names
    solute carrier family 2 (facilitated glucose transporter), member 15b
    zglut9b

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001020494.1 → NP_001018330.1  solute carrier family 2 member 15b

      See identical proteins and their annotated locations for NP_001018330.1

      Status: PROVISIONAL

      Source sequence(s)
      BC094298
      UniProtKB/TrEMBL
      Q52KK7
      Related
      ENSDARP00000069770.4, ENSDART00000075286.5
      Conserved Domains (2) summary
      cd06174
      Location:73 → 464
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam00083
      Location:23 → 478
      Sugar_tr; Sugar (and other) transporter

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007112.7 Reference GRCz11 Primary Assembly

      Range
      31573245..31598417
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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