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    capza1 capping actin protein of muscle Z-line subunit alpha 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 550078, updated on 18-Sep-2024

    Summary

    Official Symbol
    capza1provided by Xenbase
    Official Full Name
    capping actin protein of muscle Z-line subunit alpha 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-489686
    See related
    Ensembl:ENSXETG00000025061
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    capz; caz1; cappa1
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See capza1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (60770362..60799599)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (74056834..74086492)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene Wnt family member 2B Neighboring gene suppression of tumorigenicity 7 like Neighboring gene Mov10 RNA helicase Neighboring gene ras homolog family member C

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC76174

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within actin filament capping IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within barbed-end actin filament capping IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of F-actin capping protein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    F-actin-capping protein subunit alpha-1
    Names
    capping actin protein of muscle Z-line alpha subunit 1
    capping protein (actin filament) muscle Z-line, alpha 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017324.3NP_001017324.1  F-actin-capping protein subunit alpha-1

      See identical proteins and their annotated locations for NP_001017324.1

      Status: PROVISIONAL

      Source sequence(s)
      BC158140
      UniProtKB/TrEMBL
      A0A6I8QTF4, A0A803KL42, F6ZCN1, Q28DT1
      Related
      ENSXETP00000071648.2, ENSXETT00000102816.2
      Conserved Domains (1) summary
      pfam01267
      Location:17283
      F-actin_cap_A; F-actin capping protein alpha subunit

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      60770362..60799599
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)