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    rps8 ribosomal protein S8 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 549320, updated on 17-Aug-2024

    Summary

    Official Symbol
    rps8provided by Xenbase
    Official Full Name
    ribosomal protein S8provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5934818
    See related
    Ensembl:ENSXETG00000013596
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
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    Genomic context

    See rps8 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (90993905..90999120, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (72605642..72610842)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116410424 Neighboring gene small nucleolar RNA SNORA35 Neighboring gene small nucleolar RNA SNORD38 Neighboring gene small nucleolar RNA SNORD46 Neighboring gene kinesin family member 2C Neighboring gene armadillo like helical domain containing 1 Neighboring gene U5 spliceosomal RNA

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    small ribosomal subunit protein eS8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001016566.2NP_001016566.1  small ribosomal subunit protein eS8

      See identical proteins and their annotated locations for NP_001016566.1

      Status: PROVISIONAL

      Source sequence(s)
      CR760677
      UniProtKB/TrEMBL
      A0A803KJ06, F6ZD50, F7DPY0, Q28HY9
      Related
      ENSXETP00000074644.2, ENSXETT00000096321.2
      Conserved Domains (1) summary
      PTZ00148
      Location:1206
      PTZ00148; 40S ribosomal protein S8; Provisional

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      90993905..90999120 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)