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    manf mesencephalic astrocyte-derived neurotrophic factor [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 549179, updated on 17-Aug-2024

    Summary

    Official Symbol
    manfprovided by Xenbase
    Official Full Name
    mesencephalic astrocyte-derived neurotrophic factorprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-953087
    See related
    Ensembl:ENSXETG00000000073
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    arp; armet
    Orthologs
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    Genomic context

    See manf in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (127355690..127358922, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (116916095..116919410, complement)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene DDB1 and CUL4 associated factor 1 Neighboring gene RNA binding motif protein 15B Neighboring gene dedicator of cytokinesis 3 Neighboring gene MAPK activated protein kinase 3

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    mesencephalic astrocyte-derived neurotrophic factor
    Names
    arginine-rich, mutated in early stage tumors

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001016425.2NP_001016425.1  mesencephalic astrocyte-derived neurotrophic factor precursor

      See identical proteins and their annotated locations for NP_001016425.1

      Status: PROVISIONAL

      Source sequence(s)
      CR761066
      UniProtKB/TrEMBL
      B7ZTI5, Q28H42
      Related
      ENSXETP00000000137.4, ENSXETT00000000137.5
      Conserved Domains (1) summary
      pfam10208
      Location:27171
      Armet; Degradation arginine-rich protein for mis-folding

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      127355690..127358922 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)