U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC542576 heat shock protein26 [ Zea mays ]

    Gene ID: 542576, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC542576
    Gene description
    heat shock protein26
    Locus tag
    ZEAMMB73_Zm00001d028408
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    hsp18; hsp26; GRMZM2G149647
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC542576 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (33450528..33451613)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (33789055..33790140)

    Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA synthase 1 Neighboring gene uncharacterized LOC109943056 Neighboring gene ruBisCO large subunit-binding protein subunit beta, chloroplastic Neighboring gene uncharacterized LOC100284235

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Protein sHSP26 improves chloroplast performance under heat stress by interacting with specific chloroplast proteins in maize (Zea mays). Hu X, et al. J Proteomics, 2015 Feb 6. PMID 25540934
    2. Cloning, sequence analysis, and expression of a cDNA encoding a plastid-localized heat shock protein in maize. Nieto-Sotelo J, et al. Plant Physiol, 1990 Aug. PMID 16667620, Free PMC Article
    3. Annotation and expression profile analysis of 2073 full-length cDNAs from stress-induced maize (Zea mays L.) seedlings. Jia J, et al. Plant J, 2006 Dec. PMID 17076806
    4. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
    5. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These findings are useful for understanding the mechanism of heat stress response and heat-tolerant molecular breeding in maize.
      Title: Protein sHSP26 improves chloroplast performance under heat stress by interacting with specific chloroplast proteins in maize (Zea mays).
    Submit: New GeneRIF Correction

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in response to heat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    heat shock protein26
    Names
    heat shock protein 26Small heat shock protein
    pHSP26
    plastid-localized low molecular weight hsp
    siL28712
    sil28712(14)
    small heat shock protein
    umc195
    umc195(hsp26)

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001112113.2 → NP_001105583.1  heat shock protein26

      See identical proteins and their annotated locations for NP_001105583.1

      Status: VALIDATED

      Source sequence(s)
      EU952790
      UniProtKB/TrEMBL
      A0A317Y2K5, A0A8J8XBQ1, C0PP83, Q41815
      Conserved Domains (1) summary
      pfam00011
      Location:134 → 240
      HSP20; Hsp20/alpha crystallin family

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      33450528..33451613
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials