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    CRTAP cartilage associated protein [ Bos taurus (domestic cattle) ]

    Gene ID: 540924, updated on 4-Oct-2024

    Summary

    Official Symbol
    CRTAPprovided by VGNC
    Official Full Name
    cartilage associated proteinprovided by VGNC
    Primary source
    VGNC:VGNC:27727
    See related
    BGD:BT27224; Ensembl:ENSBTAG00000021442
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Genomic context

    See CRTAP in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (7458981..7492502)

    Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene galactosidase beta 1 Neighboring gene transmembrane protein with metallophosphoesterase domain Neighboring gene sorting nexin-5-like Neighboring gene sushi domain containing 5 Neighboring gene uncharacterized LOC112443433 Neighboring gene F-box and leucine rich repeat protein 2

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables collagen binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in collagen fibril organization IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in peptidyl-proline hydroxylation to 3-hydroxy-L-proline IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    cartilage-associated protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206045.1NP_001192974.1  cartilage-associated protein precursor

      See identical proteins and their annotated locations for NP_001192974.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000022
      UniProtKB/TrEMBL
      E1BJ75
      Related
      ENSBTAP00000028588.4, ENSBTAT00000028588.5

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      7458981..7492502
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059879819.1XP_059735802.1  cartilage-associated protein isoform X1

      UniProtKB/TrEMBL
      A0AAA9TUI7
      Related
      ENSBTAP00000102032.1, ENSBTAT00000110747.1