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    TM9SF1 transmembrane 9 superfamily member 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 539478, updated on 4-Oct-2024

    Summary

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    Gene symbol
    TM9SF1
    Gene description
    transmembrane 9 superfamily member 1
    See related
    BGD:BT18974; Ensembl:ENSBTAG00000002709
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TM9SF1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (20961168..20967166)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene charged multivesicular body protein 4A Neighboring gene testis specific serine kinase 4 Neighboring gene microRNA mir-11989 Neighboring gene importin 4 Neighboring gene REC8 meiotic recombination protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC139365

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein localization to membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane 9 superfamily member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001083743.1 → NP_001077212.1  transmembrane 9 superfamily member 1 precursor

      See identical proteins and their annotated locations for NP_001077212.1

      Status: PROVISIONAL

      Source sequence(s)
      BC134551
      UniProtKB/Swiss-Prot
      A4IFE9
      Related
      ENSBTAP00000003509.3, ENSBTAT00000003509.4
      Conserved Domains (1) summary
      pfam02990
      Location:58 → 562
      EMP70; Endomembrane protein 70

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      20961168..20967166
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005211380.5 → XP_005211437.1  transmembrane 9 superfamily member 1 isoform X1

      See identical proteins and their annotated locations for XP_005211437.1

      UniProtKB/TrEMBL
      F1MCZ2
      Conserved Domains (1) summary
      pfam02990
      Location:59 → 562
      EMP70; Endomembrane protein 70

    2. XM_024997743.2 → XP_024853511.1  transmembrane 9 superfamily member 1 isoform X1

      UniProtKB/TrEMBL
      F1MCZ2
      Conserved Domains (1) summary
      pfam02990
      Location:59 → 562
      EMP70; Endomembrane protein 70

    3. XM_005211379.5 → XP_005211436.1  transmembrane 9 superfamily member 1 isoform X1

      See identical proteins and their annotated locations for XP_005211436.1

      UniProtKB/TrEMBL
      F1MCZ2
      Conserved Domains (1) summary
      pfam02990
      Location:59 → 562
      EMP70; Endomembrane protein 70
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A4IFE9.1 GenPept UniProtKB/Swiss-Prot:A4IFE9

    Gene LinkOut

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