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    LINS1 lines homolog 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 539267, updated on 4-Oct-2024

    Summary

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    Official Symbol
    LINS1provided by VGNC
    Official Full Name
    lines homolog 1provided by VGNC
    Primary source
    VGNC:VGNC:30903
    See related
    BGD:BT16779; Ensembl:ENSBTAG00000016495
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    LINS
    Orthologs
    human mouse all
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    Genomic context

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    See LINS1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 21 NC_037348.1 (6023780..6056493)

    Chromosome 21 - NC_037348.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112443223 Neighboring gene ankyrin repeat and SOCS box containing 7 Neighboring gene ceramide synthase 3 Neighboring gene uncharacterized LOC132343324 Neighboring gene small ribosomal subunit protein uS3-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037348.1 Chromosome 21 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein Lines homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205649.1 → NP_001192578.1  protein Lines homolog 1

      See identical proteins and their annotated locations for NP_001192578.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000021
      UniProtKB/TrEMBL
      E1BNP0, G3MXR0
      Related
      ENSBTAP00000021928.1, ENSBTAT00000021928.3
      Conserved Domains (2) summary
      pfam14694
      Location:194 → 542
      LINES_N; Lines N-terminus
      pfam14695
      Location:713 → 748
      LINES_C; Lines C-terminus

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037348.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      6023780..6056493
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005221758.5 → XP_005221815.1  protein Lines homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_005221815.1

      UniProtKB/TrEMBL
      E1BNP0, G3MXR0
      Conserved Domains (2) summary
      pfam14694
      Location:194 → 542
      LINES_N; Lines N-terminus
      pfam14695
      Location:713 → 748
      LINES_C; Lines C-terminus

    2. XM_005221763.5 → XP_005221820.1  protein Lines homolog 1 isoform X2

      UniProtKB/TrEMBL
      G3MXR0
      Conserved Domains (2) summary
      pfam14694
      Location:194 → 471
      LINES_N; Lines N-terminus
      pfam14695
      Location:612 → 647
      LINES_C; Lines C-terminus

    3. XM_005221759.5 → XP_005221816.1  protein Lines homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_005221816.1

      UniProtKB/TrEMBL
      E1BNP0, G3MXR0
      Conserved Domains (2) summary
      pfam14694
      Location:194 → 542
      LINES_N; Lines N-terminus
      pfam14695
      Location:713 → 748
      LINES_C; Lines C-terminus

    4. XM_005221760.5 → XP_005221817.1  protein Lines homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_005221817.1

      UniProtKB/TrEMBL
      E1BNP0, G3MXR0
      Conserved Domains (2) summary
      pfam14694
      Location:194 → 542
      LINES_N; Lines N-terminus
      pfam14695
      Location:713 → 748
      LINES_C; Lines C-terminus

    5. XM_024981900.2 → XP_024837668.1  protein Lines homolog 1 isoform X1

      UniProtKB/TrEMBL
      E1BNP0, G3MXR0
      Conserved Domains (2) summary
      pfam14694
      Location:194 → 542
      LINES_N; Lines N-terminus
      pfam14695
      Location:713 → 748
      LINES_C; Lines C-terminus
    Nucleotide Protein Strain
    Heading Accession and Version

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