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    RAB3GAP2 RAB3 GTPase activating non-catalytic protein subunit 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 539227, updated on 10-Oct-2024

    Summary

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    Official Symbol
    RAB3GAP2provided by VGNC
    Official Full Name
    RAB3 GTPase activating non-catalytic protein subunit 2provided by VGNC
    Primary source
    VGNC:VGNC:33654
    See related
    BGD:BT28380; Ensembl:ENSBTAG00000012585
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RAB3GAP2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (23631524..23735521, complement)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene isoleucyl-tRNA synthetase 2, mitochondrial Neighboring gene microRNA mir-194-1 Neighboring gene microRNA mir-194b Neighboring gene microRNA mir-215 Neighboring gene microRNA mir-664b Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene uncharacterized LOC132342421

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rab3 GTPase-activating protein non-catalytic subunit
    Names
    RAB3 GTPase activating protein subunit 2 (non-catalytic)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192199.1 → NP_001179128.1  rab3 GTPase-activating protein non-catalytic subunit

      See identical proteins and their annotated locations for NP_001179128.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000016
      UniProtKB/TrEMBL
      A0AAA9T768
      Related
      ENSBTAP00000091667.1, ENSBTAT00000133553.1
      Conserved Domains (2) summary
      pfam14655
      Location:73 → 497
      RAB3GAP2_N; Rab3 GTPase-activating protein regulatory subunit N-terminus
      pfam14656
      Location:779 → 1368
      RAB3GAP2_C; Rab3 GTPase-activating protein regulatory subunit C-terminus

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      23631524..23735521 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059875466.1 → XP_059731449.1  rab3 GTPase-activating protein non-catalytic subunit isoform X1

      UniProtKB/TrEMBL
      A0AAA9S843
      Related
      ENSBTAP00000079503.1, ENSBTAT00000113250.1
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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