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    CTTNBP2NL CTTNBP2 N-terminal like [ Bos taurus (domestic cattle) ]

    Gene ID: 538981, updated on 4-Oct-2024

    Summary

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    Official Symbol
    CTTNBP2NLprovided by VGNC
    Official Full Name
    CTTNBP2 N-terminal likeprovided by VGNC
    Primary source
    VGNC:VGNC:27823
    See related
    BGD:BT25279; Ensembl:ENSBTAG00000021602
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CTTNBP2NL in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (30833200..30885029, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene capping actin protein of muscle Z-line subunit alpha 1 Neighboring gene suppression of tumorigenicity 7 like Neighboring gene small kinetochore-associated protein-like Neighboring gene Wnt family member 2B Neighboring gene uncharacterized LOC132344859 Neighboring gene potassium voltage-gated channel subfamily D member 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic variants related to gap junctions and hormone secretion influence conception rates in cows. Sugimoto M, et al. Proc Natl Acad Sci U S A, 2013 Nov 26. PMID 24218568, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. CTTNBP2NL dephosphorylated connexin 43 while its overexpression inhibited embryo implantation in mice.
      Title: Genetic variants related to gap junctions and hormone secretion influence conception rates in cows.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    CTTNBP2 N-terminal-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191181.2 → NP_001178110.1  CTTNBP2 N-terminal-like protein

      See identical proteins and their annotated locations for NP_001178110.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000003
      UniProtKB/TrEMBL
      A0A3Q1M5R5, F1MUH9
      Related
      ENSBTAP00000028787.4, ENSBTAT00000028787.5
      Conserved Domains (2) summary
      pfam09727
      Location:5 → 188
      CortBP2; Cortactin-binding protein-2
      cl26511
      Location:91 → 294
      Neuromodulin_N; Gap junction protein N-terminal region

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      30833200..30885029 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005204156.5 → XP_005204213.1  CTTNBP2 N-terminal-like protein isoform X1

      See identical proteins and their annotated locations for XP_005204213.1

      UniProtKB/TrEMBL
      A0A3Q1M5R5, F1MUH9
      Conserved Domains (2) summary
      pfam09727
      Location:5 → 188
      CortBP2; Cortactin-binding protein-2
      cl26511
      Location:91 → 294
      Neuromodulin_N; Gap junction protein N-terminal region

    2. XM_005204154.5 → XP_005204211.1  CTTNBP2 N-terminal-like protein isoform X1

      See identical proteins and their annotated locations for XP_005204211.1

      UniProtKB/TrEMBL
      A0A3Q1M5R5, F1MUH9
      Conserved Domains (2) summary
      pfam09727
      Location:5 → 188
      CortBP2; Cortactin-binding protein-2
      cl26511
      Location:91 → 294
      Neuromodulin_N; Gap junction protein N-terminal region
    Nucleotide Protein Strain
    Heading Accession and Version

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