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    INA internexin neuronal intermediate filament protein alpha [ Bos taurus (domestic cattle) ]

    Gene ID: 532236, updated on 4-Oct-2024

    Summary

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    Official Symbol
    INAprovided by VGNC
    Official Full Name
    internexin neuronal intermediate filament protein alphaprovided by VGNC
    Primary source
    VGNC:VGNC:30191
    See related
    BGD:BT18485; Ensembl:ENSBTAG00000002717
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See INA in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (23887978..23900124)

    Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 2 Neighboring gene ubiquitin-ribosomal protein eS31 fusion protein-like Neighboring gene 5'-nucleotidase, cytosolic II Neighboring gene chromosome 26 C6orf52 homolog Neighboring gene polycomb group ring finger 6 Neighboring gene ATP synthase membrane subunit k Neighboring gene TATA-box binding protein associated factor 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC142838

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of postsynaptic intermediate filament cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intermediate filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intermediate filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic intermediate filament cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-internexin
    Names
    alpha-Inx

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075958.1 → NP_001069426.1  alpha-internexin

      See identical proteins and their annotated locations for NP_001069426.1

      Status: PROVISIONAL

      Source sequence(s)
      BC123743
      UniProtKB/Swiss-Prot
      Q08DH7
      Related
      ENSBTAP00000003517.5, ENSBTAT00000003517.6
      Conserved Domains (2) summary
      pfam00038
      Location:93 → 406
      Filament; Intermediate filament protein
      pfam04732
      Location:12 → 92
      Filament_head; Intermediate filament head (DNA binding) region

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      23887978..23900124
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q08DH7.1 GenPept UniProtKB/Swiss-Prot:Q08DH7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials