RTCB RNA 2',3'-cyclic phosphate and 5'-OH ligase [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: RTCBprovided by VGNC
Official Full Name: RNA 2',3'-cyclic phosphate and 5'-OH ligaseprovided by VGNC
Primary source: VGNC:VGNC:34194
See related: BGD:BT25794; Ensembl:ENSBTAG00000011070
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as: HSPC117; C22orf28; C5H22orf28
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	5	NC_037332.1 (71017591..71038959, complement)

Chromosome 5 - NC_037332.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:: NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

MARC_36269-36270:1065101884:1 (e-PCR)
- UniSTS:467053

BZ932472 (e-PCR)
- UniSTS:475314

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA ligase (ATP) activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed
part_of tRNA-splicing ligase complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: RNA-splicing ligase RtcB homolog

Names: 3'-phosphate/5'-hydroxy nucleic acid ligase; tRNA-splicing ligase RtcB homolog

NP_001015631.1

EC 6.5.1.8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.