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    TRIM32 tripartite motif containing 32 [ Bos taurus (domestic cattle) ]

    Gene ID: 521975, updated on 10-Oct-2024

    Summary

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    Official Symbol
    TRIM32provided by VGNC
    Official Full Name
    tripartite motif containing 32provided by VGNC
    Primary source
    VGNC:VGNC:36328
    See related
    BGD:BT20482; Ensembl:ENSBTAG00000017155
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TRIM32 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (105876086..105887775)

    Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S27a pseudogene Neighboring gene pappalysin 1 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene astrotactin 2 Neighboring gene uncharacterized LOC112447849 Neighboring gene transfer RNA serine (anticodon AGA)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase TRIM32
    NP_001069292.1
    XP_005210633.1
    XP_005210635.1
    XP_005210636.1
    XP_005210637.1
    XP_059745088.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075824.2 → NP_001069292.1  E3 ubiquitin-protein ligase TRIM32

      See identical proteins and their annotated locations for NP_001069292.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120073
      UniProtKB/TrEMBL
      F6RLZ6, Q0VCP5
      Related
      ENSBTAP00000078626.1, ENSBTAT00000100418.1
      Conserved Domains (4) summary
      smart00336
      Location:98 → 138
      BBOX; B-Box-type zinc finger
      cd14961
      Location:362 → 644
      NHL_TRIM32_like; NHL repeat domain of the tripartite motif-containing protein 32 (TRIM32) and related proteins
      cd16587
      Location:19 → 65
      RING-HC_TRIM32_C-VII; RING finger, HC subclass, found in tripartite motif-containing protein 32 (TRIM32) and similar proteins
      cl25732
      Location:138 → 215
      SMC_N; RecF/RecN/SMC N terminal domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      105876086..105887775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005210578.4 → XP_005210635.1  E3 ubiquitin-protein ligase TRIM32 isoform X1

      See identical proteins and their annotated locations for XP_005210635.1

      UniProtKB/TrEMBL
      F6RLZ6, Q0VCP5
      Conserved Domains (4) summary
      smart00336
      Location:98 → 138
      BBOX; B-Box-type zinc finger
      cd14961
      Location:362 → 644
      NHL_TRIM32_like; NHL repeat domain of the tripartite motif-containing protein 32 (TRIM32) and related proteins
      cd16587
      Location:19 → 65
      RING-HC_TRIM32_C-VII; RING finger, HC subclass, found in tripartite motif-containing protein 32 (TRIM32) and similar proteins
      cl25732
      Location:138 → 215
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_005210579.5 → XP_005210636.1  E3 ubiquitin-protein ligase TRIM32 isoform X1

      See identical proteins and their annotated locations for XP_005210636.1

      UniProtKB/TrEMBL
      F6RLZ6, Q0VCP5
      Conserved Domains (4) summary
      smart00336
      Location:98 → 138
      BBOX; B-Box-type zinc finger
      cd14961
      Location:362 → 644
      NHL_TRIM32_like; NHL repeat domain of the tripartite motif-containing protein 32 (TRIM32) and related proteins
      cd16587
      Location:19 → 65
      RING-HC_TRIM32_C-VII; RING finger, HC subclass, found in tripartite motif-containing protein 32 (TRIM32) and similar proteins
      cl25732
      Location:138 → 215
      SMC_N; RecF/RecN/SMC N terminal domain

    3. XM_059889105.1 → XP_059745088.1  E3 ubiquitin-protein ligase TRIM32 isoform X2

    4. XM_005210580.5 → XP_005210637.1  E3 ubiquitin-protein ligase TRIM32 isoform X1

      See identical proteins and their annotated locations for XP_005210637.1

      UniProtKB/TrEMBL
      F6RLZ6, Q0VCP5
      Conserved Domains (4) summary
      smart00336
      Location:98 → 138
      BBOX; B-Box-type zinc finger
      cd14961
      Location:362 → 644
      NHL_TRIM32_like; NHL repeat domain of the tripartite motif-containing protein 32 (TRIM32) and related proteins
      cd16587
      Location:19 → 65
      RING-HC_TRIM32_C-VII; RING finger, HC subclass, found in tripartite motif-containing protein 32 (TRIM32) and similar proteins
      cl25732
      Location:138 → 215
      SMC_N; RecF/RecN/SMC N terminal domain

    5. XM_005210576.5 → XP_005210633.1  E3 ubiquitin-protein ligase TRIM32 isoform X1

      See identical proteins and their annotated locations for XP_005210633.1

      UniProtKB/TrEMBL
      F6RLZ6, Q0VCP5
      Related
      ENSBTAP00000081614.1, ENSBTAT00000128820.1
      Conserved Domains (4) summary
      smart00336
      Location:98 → 138
      BBOX; B-Box-type zinc finger
      cd14961
      Location:362 → 644
      NHL_TRIM32_like; NHL repeat domain of the tripartite motif-containing protein 32 (TRIM32) and related proteins
      cd16587
      Location:19 → 65
      RING-HC_TRIM32_C-VII; RING finger, HC subclass, found in tripartite motif-containing protein 32 (TRIM32) and similar proteins
      cl25732
      Location:138 → 215
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein Strain
    Heading Accession and Version

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