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    PIGV phosphatidylinositol glycan anchor biosynthesis class V [ Bos taurus (domestic cattle) ]

    Gene ID: 519213, updated on 10-Oct-2024

    Summary

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    Official Symbol
    PIGVprovided by VGNC
    Official Full Name
    phosphatidylinositol glycan anchor biosynthesis class Vprovided by VGNC
    Primary source
    VGNC:VGNC:32880
    See related
    BGD:BT18884; Ensembl:ENSBTAG00000009796
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PIGV in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (126392479..126402240, complement)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 18 Neighboring gene stratifin Neighboring gene AT-rich interaction domain 1A Neighboring gene uncharacterized LOC112443408 Neighboring gene ribosomal protein S6 kinase A1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-1,6-mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glycolipid mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of mannosyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GPI mannosyltransferase 2
    NP_001179434.1
    XP_010800870.1
    XP_024857488.1
    XP_059730504.1
    XP_059730505.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192505.1 → NP_001179434.1  GPI mannosyltransferase 2

      See identical proteins and their annotated locations for NP_001179434.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000002
      UniProtKB/TrEMBL
      A0AAA9T200, E1B9Z8
      Related
      ENSBTAP00000090424.1, ENSBTAT00000089047.1
      Conserved Domains (1) summary
      pfam04188
      Location:8 → 493
      Mannosyl_trans2; Mannosyltransferase (PIG-V)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      126392479..126402240 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059874522.1 → XP_059730505.1  GPI mannosyltransferase 2 isoform X2

      UniProtKB/TrEMBL
      A0AAA9T4D4
      Related
      ENSBTAP00000091516.1, ENSBTAT00000089050.1

    2. XM_010802568.4 → XP_010800870.1  GPI mannosyltransferase 2 isoform X1

      See identical proteins and their annotated locations for XP_010800870.1

      UniProtKB/TrEMBL
      A0AAA9T200, E1B9Z8
      Conserved Domains (1) summary
      pfam04188
      Location:8 → 493
      Mannosyl_trans2; Mannosyltransferase (PIG-V)

    3. XM_025001720.2 → XP_024857488.1  GPI mannosyltransferase 2 isoform X1

      UniProtKB/TrEMBL
      A0AAA9T200, E1B9Z8
      Conserved Domains (1) summary
      pfam04188
      Location:8 → 493
      Mannosyl_trans2; Mannosyltransferase (PIG-V)

    4. XM_059874521.1 → XP_059730504.1  GPI mannosyltransferase 2 isoform X1

      UniProtKB/TrEMBL
      A0AAA9T200
    Nucleotide Protein Strain
    Heading Accession and Version

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