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    FIGNL2 fidgetin like 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 518615, updated on 4-Oct-2024

    Summary

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    Official Symbol
    FIGNL2provided by VGNC
    Official Full Name
    fidgetin like 2provided by VGNC
    Primary source
    VGNC:VGNC:56200
    See related
    BGD:BT14472; Ensembl:ENSBTAG00000002673
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See FIGNL2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (28014906..28042870)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene activin A receptor like type 1 Neighboring gene ankyrin repeat domain 33 Neighboring gene transmembrane and death domain 1 Neighboring gene sodium voltage-gated channel alpha subunit 8 Neighboring gene transfer RNA glutamic acid (anticodon UUC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule severing ATPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fidgetin-like protein 2
    NP_001201834.1
    XP_005206269.1
    XP_005206270.1
    XP_005206271.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001214905.1 → NP_001201834.1  fidgetin-like protein 2

      See identical proteins and their annotated locations for NP_001201834.1

      Status: INFERRED

      Source sequence(s)
      NKLS02000005
      UniProtKB/TrEMBL
      F1MP95
      Conserved Domains (3) summary
      smart00382
      Location:427 → 562
      AAA; ATPases associated with a variety of cellular activities
      pfam00004
      Location:431 → 560
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam09336
      Location:617 → 653
      Vps4_C; Vps4 C terminal oligomerization domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      28014906..28042870
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005206213.5 → XP_005206270.1  fidgetin-like protein 2 isoform X1

      See identical proteins and their annotated locations for XP_005206270.1

      UniProtKB/TrEMBL
      F1MP95
      Related
      ENSBTAP00000098146.1, ENSBTAT00000102345.1
      Conserved Domains (3) summary
      smart00382
      Location:427 → 562
      AAA; ATPases associated with a variety of cellular activities
      pfam00004
      Location:431 → 560
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam09336
      Location:617 → 653
      Vps4_C; Vps4 C terminal oligomerization domain

    2. XM_005206212.5 → XP_005206269.1  fidgetin-like protein 2 isoform X1

      See identical proteins and their annotated locations for XP_005206269.1

      UniProtKB/TrEMBL
      F1MP95
      Conserved Domains (3) summary
      smart00382
      Location:427 → 562
      AAA; ATPases associated with a variety of cellular activities
      pfam00004
      Location:431 → 560
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam09336
      Location:617 → 653
      Vps4_C; Vps4 C terminal oligomerization domain

    3. XM_005206214.5 → XP_005206271.1  fidgetin-like protein 2 isoform X1

      See identical proteins and their annotated locations for XP_005206271.1

      UniProtKB/TrEMBL
      F1MP95
      Related
      ENSBTAP00000098620.1, ENSBTAT00000116233.1
      Conserved Domains (3) summary
      smart00382
      Location:427 → 562
      AAA; ATPases associated with a variety of cellular activities
      pfam00004
      Location:431 → 560
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam09336
      Location:617 → 653
      Vps4_C; Vps4 C terminal oligomerization domain
    Nucleotide Protein Strain
    Heading Accession and Version

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