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    DDX19B DEAD (Asp-Glu-Ala-As) box polypeptide 19B [ Bos taurus (domestic cattle) ]

    Gene ID: 517438, updated on 12-Oct-2024

    Summary

    Gene symbol
    DDX19B
    Gene description
    DEAD (Asp-Glu-Ala-As) box polypeptide 19B
    See related
    BGD:BT23836; Ensembl:ENSBTAG00000020714
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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    Genomic context

    See DDX19B in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (1762014..1784795, complement)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 2 Neighboring gene DEAD-box helicase 19A Neighboring gene alanyl-tRNA synthetase 1 Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene exosome component 6

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    General gene information

    Markers

    Clone Names

    • MGC134354

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in poly(A)+ mRNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic stress granule IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    ATP-dependent RNA helicase DDX19B
    NP_001039695.1
    XP_005218406.1
    XP_059732695.1
    XP_059732696.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046230.1NP_001039695.1  ATP-dependent RNA helicase DDX19B

      See identical proteins and their annotated locations for NP_001039695.1

      Status: PROVISIONAL

      Source sequence(s)
      BC110249
      UniProtKB/TrEMBL
      A0AAF6YL22, Q2YDF3
      Conserved Domains (3) summary
      PTZ00424
      Location:96474
      PTZ00424; helicase 45; Provisional
      cd00079
      Location:312447
      HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
      cd00268
      Location:99301
      DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      1762014..1784795 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059876712.1XP_059732695.1  ATP-dependent RNA helicase DDX19B isoform X1

    2. XM_005218349.5XP_005218406.1  ATP-dependent RNA helicase DDX19B isoform X2

      See identical proteins and their annotated locations for XP_005218406.1

      UniProtKB/TrEMBL
      A0AAF6YL22, F1MUT6
      Related
      ENSBTAP00000004644.4, ENSBTAT00000004644.5
      Conserved Domains (2) summary
      cd18787
      Location:307443
      SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
      cl28899
      Location:75303
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
    3. XM_059876713.1XP_059732696.1  ATP-dependent RNA helicase DDX19B isoform X3