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    HNRNPM heterogeneous nuclear ribonucleoprotein M [ Bos taurus (domestic cattle) ]

    Gene ID: 515290, updated on 10-Oct-2024

    Summary

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    Official Symbol
    HNRNPMprovided by VGNC
    Official Full Name
    heterogeneous nuclear ribonucleoprotein Mprovided by VGNC
    Primary source
    VGNC:VGNC:55212
    See related
    BGD:BT18757; Ensembl:ENSBTAG00000021039
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    HNRPM
    Orthologs
    human mouse all
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    Genomic context

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    See HNRNPM in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (17058463..17098620)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene RAB11B, member RAS oncogene family Neighboring gene membrane associated ring-CH-type finger 2 Neighboring gene PML-RARA regulated adaptor molecule 1 Neighboring gene zinc finger protein 414

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mRNA stability involved in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of post-mRNA release spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein M

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191223.1 → NP_001178152.1  heterogeneous nuclear ribonucleoprotein M

      See identical proteins and their annotated locations for NP_001178152.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000007
      UniProtKB/TrEMBL
      A0A3Q1MJD5, F1MY44
      Related
      ENSBTAP00000074476.1, ENSBTAT00000077758.2
      Conserved Domains (4) summary
      pfam11532
      Location:41 → 70
      HnRNP_M; Heterogeneous nuclear ribonucleoprotein M
      cd12657
      Location:72 → 147
      RRM1_hnRNPM; RNA recognition motif 1 (RRM1) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
      cd12659
      Location:204 → 279
      RRM2_hnRNPM; RNA recognition motif 2 (RRM2) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
      cd12661
      Location:654 → 730
      RRM3_hnRNPM; RNA recognition motif 3 (RRM3) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      17058463..17098620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059888139.1 → XP_059744122.1  heterogeneous nuclear ribonucleoprotein M isoform X1

    2. XM_059888144.1 → XP_059744127.1  heterogeneous nuclear ribonucleoprotein M isoform X6

    3. XM_059888140.1 → XP_059744123.1  heterogeneous nuclear ribonucleoprotein M isoform X2

    4. XM_059888142.1 → XP_059744125.1  heterogeneous nuclear ribonucleoprotein M isoform X4

    5. XM_059888146.1 → XP_059744129.1  heterogeneous nuclear ribonucleoprotein M isoform X8

    6. XM_059888141.1 → XP_059744124.1  heterogeneous nuclear ribonucleoprotein M isoform X3

    7. XM_059888148.1 → XP_059744131.1  heterogeneous nuclear ribonucleoprotein M isoform X10

    8. XM_059888145.1 → XP_059744128.1  heterogeneous nuclear ribonucleoprotein M isoform X7

    9. XM_059888147.1 → XP_059744130.1  heterogeneous nuclear ribonucleoprotein M isoform X9

    10. XM_005208875.4 → XP_005208932.1  heterogeneous nuclear ribonucleoprotein M isoform X11

      See identical proteins and their annotated locations for XP_005208932.1

      UniProtKB/TrEMBL
      F1MY44
      Related
      ENSBTAP00000028022.6, ENSBTAT00000028022.6
      Conserved Domains (4) summary
      pfam11532
      Location:41 → 70
      HnRNP_M; Heterogeneous nuclear ribonucleoprotein M
      cd12657
      Location:72 → 147
      RRM1_hnRNPM; RNA recognition motif 1 (RRM1) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
      cd12659
      Location:165 → 240
      RRM2_hnRNPM; RNA recognition motif 2 (RRM2) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
      cd12661
      Location:615 → 691
      RRM3_hnRNPM; RNA recognition motif 3 (RRM3) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)

    11. XM_059888143.1 → XP_059744126.1  heterogeneous nuclear ribonucleoprotein M isoform X5

    Nucleotide Protein Strain
    Heading Accession and Version

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