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    TRMT11 tRNA methyltransferase 11 homolog [ Bos taurus (domestic cattle) ]

    Gene ID: 514867, updated on 10-Oct-2024

    Summary

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    Official Symbol
    TRMT11provided by VGNC
    Official Full Name
    tRNA methyltransferase 11 homologprovided by VGNC
    Primary source
    VGNC:VGNC:36368
    See related
    BGD:BT24267; Ensembl:ENSBTAG00000001957
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TRMT11 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (25255040..25317333, complement)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112448124 Neighboring gene microRNA mir-2284o Neighboring gene histidine triad nucleotide binding protein 3 Neighboring gene uncharacterized LOC132346207 Neighboring gene nuclear receptor coactivator 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC152203

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA (guanine(10)-N2)-methyltransferase homolog
    Names
    tRNA guanosine-2'-O-methyltransferase TRM11 homolog
    NP_001073742.1
    XP_010806693.1
    XP_024852321.1
    XP_024852322.1
    XP_059745631.1
    XP_059745633.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080273.2 → NP_001073742.1  tRNA (guanine(10)-N2)-methyltransferase homolog

      See identical proteins and their annotated locations for NP_001073742.1

      Status: PROVISIONAL

      Source sequence(s)
      BC122733
      UniProtKB/Swiss-Prot
      Q05B63
      UniProtKB/TrEMBL
      A0A3Q1MRU3
      Related
      ENSBTAP00000073609.2, ENSBTAT00000078273.2
      Conserved Domains (1) summary
      cl28094
      Location:9 → 413
      Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      25255040..25317333 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024996554.2 → XP_024852322.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X5

      Conserved Domains (1) summary
      cl28094
      Location:39 → 225
      Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]

    2. XM_059889648.1 → XP_059745631.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X1

      UniProtKB/TrEMBL
      A0A452DHV3
      Related
      ENSBTAP00000002544.5, ENSBTAT00000002544.6

    3. XM_024996553.2 → XP_024852321.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MRU3
      Conserved Domains (1) summary
      cl28094
      Location:7 → 350
      Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]

    4. XM_010808391.4 → XP_010806693.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X2

      UniProtKB/TrEMBL
      A0A3Q1MRU3
      Conserved Domains (2) summary
      COG1041
      Location:9 → 413
      Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]
      cl17173
      Location:190 → 321
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    5. XM_059889650.1 → XP_059745633.1  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X3

      UniProtKB/TrEMBL
      A0A3Q1LP54
      Related
      ENSBTAP00000061845.1, ENSBTAT00000068361.2

    RNA

    1. XR_808669.4 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q05B63.1 GenPept UniProtKB/Swiss-Prot:Q05B63

    Gene LinkOut

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