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    EXOC2 exocyst complex component 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 513431, updated on 10-Oct-2024

    Summary

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    Official Symbol
    EXOC2provided by VGNC
    Official Full Name
    exocyst complex component 2provided by VGNC
    Primary source
    VGNC:VGNC:28644
    See related
    BGD:BT21645; Ensembl:ENSBTAG00000020215
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See EXOC2 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (52047072..52170037)

    Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107131768 Neighboring gene uncharacterized LOC101904512 Neighboring gene interferon regulatory factor 4 Neighboring gene dual specificity phosphatase 22 Neighboring gene uncharacterized LOC132343667

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exocyst complex component 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206159.1 → NP_001193088.1  exocyst complex component 2

      See identical proteins and their annotated locations for NP_001193088.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000023
      UniProtKB/TrEMBL
      A0AAA9TNU9, E1BDW9
      Related
      ENSBTAP00000026920.3, ENSBTAT00000026920.5
      Conserved Domains (2) summary
      pfam01833
      Location:8 → 91
      TIG; IPT/TIG domain
      pfam15469
      Location:198 → 377
      Sec5; Exocyst complex component Sec5

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      52047072..52170037
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059880305.1 → XP_059736288.1  exocyst complex component 2 isoform X1

      UniProtKB/TrEMBL
      E1BDW9

    2. XM_005223863.5 → XP_005223920.1  exocyst complex component 2 isoform X1

      See identical proteins and their annotated locations for XP_005223920.1

      UniProtKB/TrEMBL
      A0AAA9TNU9, E1BDW9
      Conserved Domains (2) summary
      pfam01833
      Location:8 → 91
      TIG; IPT/TIG domain
      pfam15469
      Location:198 → 377
      Sec5; Exocyst complex component Sec5

    3. XM_010818594.4 → XP_010816896.1  exocyst complex component 2 isoform X2

      UniProtKB/TrEMBL
      A0AAA9S5C4, A0AAA9TNU9
      Related
      ENSBTAP00000081145.1, ENSBTAT00000101659.1
      Conserved Domains (2) summary
      cd00603
      Location:8 → 89
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      pfam15469
      Location:198 → 377
      Sec5; Exocyst complex component Sec5

    4. XM_010818595.4 → XP_010816897.1  exocyst complex component 2 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1LL76
      Conserved Domains (2) summary
      cd00603
      Location:8 → 89
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      pfam15469
      Location:198 → 377
      Sec5; Exocyst complex component Sec5

    5. XM_010818596.4 → XP_010816898.1  exocyst complex component 2 isoform X5

      UniProtKB/TrEMBL
      A0A3Q1LL76
      Conserved Domains (2) summary
      cd00603
      Location:8 → 89
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      pfam15469
      Location:198 → 377
      Sec5; Exocyst complex component Sec5

    6. XM_005223865.5 → XP_005223922.1  exocyst complex component 2 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1LL76
      Conserved Domains (2) summary
      cd00603
      Location:8 → 89
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      pfam15469
      Location:198 → 377
      Sec5; Exocyst complex component Sec5

    7. XM_024983565.2 → XP_024839333.1  exocyst complex component 2 isoform X6

      UniProtKB/TrEMBL
      A0AAA9TNU9
      Conserved Domains (1) summary
      pfam15469
      Location:48 → 227
      Sec5; Exocyst complex component Sec5

    RNA

    1. XR_814965.4 RNA Sequence

    2. XR_003032016.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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