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    CHP1 calcineurin like EF-hand protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 512662, updated on 12-Oct-2024

    Summary

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    Official Symbol
    CHP1provided by VGNC
    Official Full Name
    calcineurin like EF-hand protein 1provided by VGNC
    Primary source
    VGNC:VGNC:27310
    See related
    BGD:BT24713; Ensembl:ENSBTAG00000027173
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    CHP
    Orthologs
    human mouse all
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    Genomic context

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    See CHP1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (36719642..36755890)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132346361 Neighboring gene INO80 complex ATPase subunit Neighboring gene small ubiquitin-related modifier 1-like Neighboring gene exonuclease 3'-5' domain containing 1 Neighboring gene small nucleolar RNA U89 Neighboring gene nucleolar and spindle associated protein 1 Neighboring gene uncharacterized LOC132346362 Neighboring gene Opa interacting protein 5 Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcineurin B homologous protein 1
    Names
    EF-hand calcium-binding domain-containing protein p22
    calcineurin B homolog
    calcineurin B-like protein
    calcineurin homologous protein
    calcium binding protein P22
    calcium-binding protein CHP
    calcium-binding protein p22

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075576.1 → NP_001069044.1  calcineurin B homologous protein 1

      See identical proteins and their annotated locations for NP_001069044.1

      Status: PROVISIONAL

      Source sequence(s)
      BC103418
      UniProtKB/Swiss-Prot
      Q3SYS6
      UniProtKB/TrEMBL
      A0AAA9SZW7
      Related
      ENSBTAP00000038767.2, ENSBTAT00000038963.4
      Conserved Domains (1) summary
      COG5126
      Location:1 → 182
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      36719642..36755890
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3SYS6.1 GenPept UniProtKB/Swiss-Prot:Q3SYS6

    Gene LinkOut

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