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    RAB9A RAB9A, member RAS oncogene family [ Bos taurus (domestic cattle) ]

    Gene ID: 511776, updated on 4-Oct-2024

    Summary

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    Official Symbol
    RAB9Aprovided by VGNC
    Official Full Name
    RAB9A, member RAS oncogene familyprovided by VGNC
    Primary source
    VGNC:VGNC:33664
    See related
    BGD:BT14045; Ensembl:ENSBTAG00000010923
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RAB9A in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (129812665..129832164, complement)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene OFD1 centriole and centriolar satellite protein Neighboring gene U6 spliceosomal RNA Neighboring gene trafficking protein particle complex subunit 2 Neighboring gene transcription elongation factor A N-terminal and central domain containing Neighboring gene epidermal growth factor-like protein 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC140656

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Rab protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde transport, endosome to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in late endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-9A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075538.2 → NP_001069006.1  ras-related protein Rab-9A

      See identical proteins and their annotated locations for NP_001069006.1

      Status: PROVISIONAL

      Source sequence(s)
      BC123543
      UniProtKB/TrEMBL
      Q08DW1
      Related
      ENSBTAP00000094012.1, ENSBTAT00000118588.1
      Conserved Domains (1) summary
      cd04116
      Location:3 → 172
      Rab9; Rab GTPase family 9 (Rab9)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      129812665..129832164 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024987887.2 → XP_024843655.1  ras-related protein Rab-9A isoform X1

      UniProtKB/TrEMBL
      Q08DW1
      Conserved Domains (1) summary
      cd04116
      Location:3 → 172
      Rab9; Rab GTPase family 9 (Rab9)

    2. XM_005228430.5 → XP_005228487.1  ras-related protein Rab-9A isoform X1

      See identical proteins and their annotated locations for XP_005228487.1

      UniProtKB/TrEMBL
      Q08DW1
      Related
      ENSBTAP00000014511.4, ENSBTAT00000014511.6
      Conserved Domains (1) summary
      cd04116
      Location:3 → 172
      Rab9; Rab GTPase family 9 (Rab9)
    Nucleotide Protein Strain
    Heading Accession and Version

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