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    LYSMD2 LysM domain containing 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 511013, updated on 4-Oct-2024

    Summary

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    Official Symbol
    LYSMD2provided by VGNC
    Official Full Name
    LysM domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:31113
    See related
    BGD:BT17259
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See LYSMD2 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (58629450..58642432)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene tropomodulin 2 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene secretogranin III Neighboring gene dynein light chain 1, cytoplasmic-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    lysM and putative peptidoglycan-binding domain-containing protein 2
    Names
    LysM, putative peptidoglycan-binding, domain containing 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075485.1 → NP_001068953.1  lysM and putative peptidoglycan-binding domain-containing protein 2

      See identical proteins and their annotated locations for NP_001068953.1

      Status: PROVISIONAL

      Source sequence(s)
      BC116100
      UniProtKB/Swiss-Prot
      Q1JQA8
      UniProtKB/TrEMBL
      A0AAA9TPA5
      Conserved Domains (1) summary
      cd00118
      Location:72 → 116
      LysM; Lysine Motif is a small domain involved in binding peptidoglycan

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      58629450..58642432
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1JQA8.1 GenPept UniProtKB/Swiss-Prot:Q1JQA8

    Gene LinkOut

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