LIN7C lin-7 homolog C, crumbs cell polarity complex component [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: LIN7Cprovided by VGNC
Official Full Name: lin-7 homolog C, crumbs cell polarity complex componentprovided by VGNC
Primary source: VGNC:VGNC:30897
See related: Ensembl:ENSBTAG00000001460
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 15

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	15	NC_037342.1 (58214578..58224553, complement)

Chromosome 15 - NC_037342.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables L27 domain binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in maintenance of epithelial cell apical/basal polarity	IEA Inferred from Electronic Annotation more info	PubMed
involved_in neurotransmitter secretion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in protein localization to basolateral plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of MPP7-DLG1-LIN7 complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in basolateral plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in cell-cell junction	IEA Inferred from Electronic Annotation more info	PubMed
located_in synapse	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: protein lin-7 homolog C

Names: lin-7C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001075431.2 → NP_001068899.1 protein lin-7 homolog C

See identical proteins and their annotated locations for NP_001068899.1

Status: PROVISIONAL

Source sequence(s)

BC120124

UniProtKB/Swiss-Prot

Q0P5F3

UniProtKB/TrEMBL

A0A452DHU4

Related

ENSBTAP00000001914.6, ENSBTAT00000001914.6

Conserved Domains (2) summary

cd00992
Location:91 → 172

PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

pfam02828
Location:14 → 66

L27; L27 domain