U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    RAB7A RAB7A, member RAS oncogene family [ Bos taurus (domestic cattle) ]

    Gene ID: 509970, updated on 12-Oct-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RAB7Aprovided by VGNC
    Official Full Name
    RAB7A, member RAS oncogene familyprovided by VGNC
    Primary source
    VGNC:VGNC:33660
    See related
    BGD:BT11257
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RAB7A in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (59191776..59239203, complement)

    Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-2374 Neighboring gene 5-hydroxymethylcytosine binding, ES cell specific Neighboring gene H1.10 linker histone Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene transfer RNA lysine (anticodon UUU)

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • MGC127597

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endosome to lysosome transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phagosome-lysosome fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in late endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ras-related protein Rab-7a
    NP_001030253.1
    XP_005223227.1
    XP_010816303.1
    XP_059735565.1
    XP_059735566.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001035081.1 → NP_001030253.1  ras-related protein Rab-7a

      See identical proteins and their annotated locations for NP_001030253.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102415
      UniProtKB/Swiss-Prot
      Q3T0F5
      Conserved Domains (2) summary
      smart00175
      Location:9 → 176
      RAB; Rab subfamily of small GTPases
      cd01862
      Location:9 → 179
      Rab7; Rab GTPase family 7 (Rab7)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      59191776..59239203 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010818001.1 → XP_010816303.1  ras-related protein Rab-7a isoform X1

      See identical proteins and their annotated locations for XP_010816303.1

      Conserved Domains (1) summary
      cd01862
      Location:9 → 179
      Rab7; Rab GTPase family 7 (Rab7)

    2. XM_005223170.4 → XP_005223227.1  ras-related protein Rab-7a isoform X1

      See identical proteins and their annotated locations for XP_005223227.1

      Conserved Domains (1) summary
      cd01862
      Location:9 → 179
      Rab7; Rab GTPase family 7 (Rab7)

    3. XM_059879582.1 → XP_059735565.1  ras-related protein Rab-7a isoform X1

    4. XM_059879583.1 → XP_059735566.1  ras-related protein Rab-7a isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3T0F5.1 GenPept UniProtKB/Swiss-Prot:Q3T0F5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials