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    TMCO3 transmembrane and coiled-coil domains 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 509611, updated on 4-Oct-2024

    Summary

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    Official Symbol
    TMCO3provided by VGNC
    Official Full Name
    transmembrane and coiled-coil domains 3provided by VGNC
    Primary source
    VGNC:VGNC:35930
    See related
    BGD:BT12608; Ensembl:ENSBTAG00000015704
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TMCO3 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (86682017..86704834)

    Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(I) chain Neighboring gene microRNA mir-2302 Neighboring gene ADP-ribosylhydrolase like 1 Neighboring gene defective in cullin neddylation 1 domain containing 2 Neighboring gene transcription factor Dp-1 Neighboring gene ATPase H+/K+ transporting subunit beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables potassium:proton antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane and coiled-coil domain-containing protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001098003.1 → NP_001091472.1  transmembrane and coiled-coil domain-containing protein 3 precursor

      See identical proteins and their annotated locations for NP_001091472.1

      Status: PROVISIONAL

      Source sequence(s)
      BC140627
      UniProtKB/TrEMBL
      A5D7N7
      Related
      ENSBTAP00000020850.5, ENSBTAT00000020850.6
      Conserved Domains (2) summary
      pfam00999
      Location:274 → 645
      Na_H_Exchanger; Sodium/hydrogen exchanger family
      cl25732
      Location:60 → 271
      SMC_N; RecF/RecN/SMC N terminal domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      86682017..86704834
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005213985.5 → XP_005214042.1  transmembrane and coiled-coil domain-containing protein 3 isoform X1

      See identical proteins and their annotated locations for XP_005214042.1

      UniProtKB/TrEMBL
      A5D7N7
      Conserved Domains (2) summary
      pfam00999
      Location:274 → 645
      Na_H_Exchanger; Sodium/hydrogen exchanger family
      cl25732
      Location:60 → 271
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials