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    ASGR1 asialoglycoprotein receptor 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 509121, updated on 10-Oct-2024

    Summary

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    Official Symbol
    ASGR1provided by VGNC
    Official Full Name
    asialoglycoprotein receptor 1provided by VGNC
    Primary source
    VGNC:VGNC:26209
    See related
    BGD:BT18630; Ensembl:ENSBTAG00000012071
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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    Genomic context

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    See ASGR1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (26894027..26899256, complement)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain containing 10A Neighboring gene asialoglycoprotein receptor 2 Neighboring gene small nucleolar RNA SNORA1 Neighboring gene discs large MAGUK scaffold protein 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC133691

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables D-mannose binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables fucose binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological process involved in interspecies interaction between organisms IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    asialoglycoprotein receptor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037590.2 → NP_001032679.1  asialoglycoprotein receptor 1

      See identical proteins and their annotated locations for NP_001032679.1

      Status: PROVISIONAL

      Source sequence(s)
      BC110029
      UniProtKB/TrEMBL
      A0AAA9RUX4, Q32KM0
      Related
      ENSBTAP00000016010.4, ENSBTAT00000016010.6
      Conserved Domains (2) summary
      cd03590
      Location:153 → 277
      CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
      pfam03954
      Location:18 → 143
      Lectin_N; Hepatic lectin, N-terminal domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      26894027..26899256 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015458613.3 → XP_015314099.1  asialoglycoprotein receptor 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9RUX4, Q32KM0
      Conserved Domains (2) summary
      cd03590
      Location:153 → 277
      CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
      pfam03954
      Location:18 → 143
      Lectin_N; Hepatic lectin, N-terminal domain

    2. XM_059877875.1 → XP_059733858.1  asialoglycoprotein receptor 1 isoform X1

      UniProtKB/TrEMBL
      Q32KM0
    Nucleotide Protein Strain
    Heading Accession and Version

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