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    MYOT myotilin [ Bos taurus (domestic cattle) ]

    Gene ID: 507884, updated on 4-Oct-2024

    Summary

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    Official Symbol
    MYOTprovided by VGNC
    Official Full Name
    myotilinprovided by VGNC
    Primary source
    VGNC:VGNC:55225
    See related
    BGD:BT11695; Ensembl:ENSBTAG00000007782
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See MYOT in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (49339661..49357206)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 3 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene heterogeneous nuclear ribonucleoprotein A0 Neighboring gene polycystin 2 like 2, transient receptor potential cation channel Neighboring gene family with sequence similarity 13 member B Neighboring gene transfer RNA glycine (anticodon UCC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC140017

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell-cell adhesion mediator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in dendrite self-avoidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myotilin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075335.1 → NP_001068803.1  myotilin

      See identical proteins and their annotated locations for NP_001068803.1

      Status: PROVISIONAL

      Source sequence(s)
      BC119939
      UniProtKB/TrEMBL
      A0A3Q1LLL4, Q0VCX9
      Related
      ENSBTAP00000010231.3, ENSBTAT00000010231.4
      Conserved Domains (3) summary
      cd05892
      Location:367 → 441
      Ig_Myotilin_C; C-terminal immunoglobulin (Ig)-like domain of myotilin
      pfam07679
      Location:251 → 341
      I-set; Immunoglobulin I-set domain
      cl11960
      Location:250 → 334
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      49339661..49357206
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010807298.4 → XP_010805600.1  myotilin isoform X1

      See identical proteins and their annotated locations for XP_010805600.1

      UniProtKB/TrEMBL
      A0A3Q1LLL4, F1MPU4
      Conserved Domains (2) summary
      cd05892
      Location:367 → 441
      Ig_Myotilin_C; C-terminal immunoglobulin (Ig)-like domain of myotilin
      pfam07679
      Location:251 → 341
      I-set; Immunoglobulin I-set domain

    2. XM_005209366.5 → XP_005209423.1  myotilin isoform X2

      See identical proteins and their annotated locations for XP_005209423.1

      UniProtKB/TrEMBL
      A0A3Q1LLL4
      Conserved Domains (2) summary
      cd05892
      Location:366 → 440
      Ig_Myotilin_C; C-terminal immunoglobulin (Ig)-like domain of myotilin
      pfam07679
      Location:250 → 340
      I-set; Immunoglobulin I-set domain
    Nucleotide Protein Strain
    Heading Accession and Version

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