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    AP1G1 adaptor related protein complex 1 subunit gamma 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 507677, updated on 10-Oct-2024

    Summary

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    Official Symbol
    AP1G1provided by VGNC
    Official Full Name
    adaptor related protein complex 1 subunit gamma 1provided by VGNC
    Primary source
    VGNC:VGNC:25977
    See related
    BGD:BT26510; Ensembl:ENSBTAG00000002769
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See AP1G1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (39248017..39350493)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-2328 Neighboring gene zinc finger protein 821 Neighboring gene U6 spliceosomal RNA Neighboring gene ataxin 1 like Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene small ribosomal subunit protein uS8 Neighboring gene small nucleolar RNA SNORD71 Neighboring gene PH domain and leucine rich repeat protein phosphatase 2 Neighboring gene MARVEL domain containing 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cargo-sorting signals promote polymerization of adaptor protein-1 in an Arf-1.GTP-independent manner. Lee I, et al. Arch Biochem Biophys, 2008 Nov 1. PMID 18762162, Free PMC Article
    2. Interaction of the cation-dependent mannose 6-phosphate receptor with GGA proteins. Doray B, et al. J Biol Chem, 2002 May 24. PMID 11886874
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables clathrin adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi to vacuole transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in receptor-mediated endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of AP-1 adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of membrane coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP-1 complex subunit gamma-1
    Names
    adaptor related protein complex 1 gamma 1 subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191436.1 → NP_001178365.1  AP-1 complex subunit gamma-1

      See identical proteins and their annotated locations for NP_001178365.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000018
      UniProtKB/TrEMBL
      A0A3Q1M952, F1MF68
      Related
      ENSBTAP00000066662.1, ENSBTAT00000073132.2
      Conserved Domains (4) summary
      smart00809
      Location:712 → 820
      Alpha_adaptinC2; Adaptin C-terminal domain
      pfam05109
      Location:593 → 711
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00044
      Location:142 → 163
      HEAT; HEAT repeat [structural motif]
      pfam01602
      Location:23 → 577
      Adaptin_N; Adaptin N terminal region

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      39248017..39350493
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059876569.1 → XP_059732552.1  AP-1 complex subunit gamma-1 isoform X1

      Related
      ENSBTAP00000095741.1, ENSBTAT00000113139.1

    2. XM_005218489.5 → XP_005218546.1  AP-1 complex subunit gamma-1 isoform X1

      See identical proteins and their annotated locations for XP_005218546.1

      UniProtKB/TrEMBL
      F1MF68
      Conserved Domains (4) summary
      smart00809
      Location:709 → 817
      Alpha_adaptinC2; Adaptin C-terminal domain
      sd00044
      Location:142 → 163
      HEAT; HEAT repeat [structural motif]
      pfam01602
      Location:23 → 574
      Adaptin_N; Adaptin N terminal region
      cl25496
      Location:590 → 708
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

    3. XM_059876570.1 → XP_059732553.1  AP-1 complex subunit gamma-1 isoform X1

      Related
      ENSBTAP00000003599.6, ENSBTAT00000003599.7

    4. XM_059876571.1 → XP_059732554.1  AP-1 complex subunit gamma-1 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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