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    UFD1 ubiquitin recognition factor in ER associated degradation 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 507124, updated on 4-Oct-2024

    Summary

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    Official Symbol
    UFD1provided by VGNC
    Official Full Name
    ubiquitin recognition factor in ER associated degradation 1provided by VGNC
    Primary source
    VGNC:VGNC:36645
    See related
    Ensembl:ENSBTAG00000004284
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    UFD1L
    Orthologs
    human mouse all
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    Genomic context

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    See UFD1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (72702990..72716393, complement)

    Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene histone cell cycle regulator Neighboring gene chromosome 17 C22orf39 homolog Neighboring gene mitochondrial ribosomal protein L40 Neighboring gene cell division cycle 45 Neighboring gene claudin 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC142939

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables polyubiquitin modification-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of VCP-NPL4-UFD1 AAA ATPase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin recognition factor in ER-associated degradation protein 1
    Names
    ubiquitin fusion degradation 1 like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075300.1 → NP_001068768.1  ubiquitin recognition factor in ER-associated degradation protein 1

      See identical proteins and their annotated locations for NP_001068768.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120441
      UniProtKB/TrEMBL
      Q0P568
      Conserved Domains (1) summary
      pfam03152
      Location:19 → 193
      UFD1; Ubiquitin fusion degradation protein UFD1

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      72702990..72716393 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005218209.5 → XP_005218266.1  ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1N3E8
      Related
      ENSBTAP00000064002.2, ENSBTAT00000080740.2
      Conserved Domains (1) summary
      pfam03152
      Location:19 → 193
      UFD1; Ubiquitin fusion degradation protein UFD1
    Nucleotide Protein Strain
    Heading Accession and Version

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