U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CEP43 centrosomal protein 43 [ Bos taurus (domestic cattle) ]

    Gene ID: 506246, updated on 4-Oct-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CEP43provided by VGNC
    Official Full Name
    centrosomal protein 43provided by VGNC
    Primary source
    VGNC:VGNC:28985
    See related
    Ensembl:ENSBTAG00000014495
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    FGFR1OP
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CEP43 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (101818075..101846459)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene ribonuclease T2 Neighboring gene uncharacterized LOC104969670 Neighboring gene uncharacterized LOC112448093 Neighboring gene C-C motif chemokine receptor 6

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule anchoring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    centrosomal protein 43
    Names
    FGFR1 oncogene partner 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077859.2 → NP_001071327.1  centrosomal protein 43

      See identical proteins and their annotated locations for NP_001071327.1

      Status: PROVISIONAL

      Source sequence(s)
      BC110279
      UniProtKB/Swiss-Prot
      Q2YDD1
      UniProtKB/TrEMBL
      A0AAA9TGS9
      Related
      ENSBTAP00000019271.6, ENSBTAT00000019271.7
      Conserved Domains (1) summary
      pfam09398
      Location:54 → 134
      FOP_dimer; FOP N terminal dimerization domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      101818075..101846459
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024996446.2 → XP_024852214.1  centrosomal protein 43 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LMZ9, A0AAA9TAM1
      Related
      ENSBTAP00000058303.1, ENSBTAT00000086315.2
      Conserved Domains (1) summary
      pfam09398
      Location:54 → 134
      FOP_dimer; FOP N terminal dimerisation domain
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2YDD1.1 GenPept UniProtKB/Swiss-Prot:Q2YDD1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials