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    BCAT1 branched chain amino acid transaminase 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 505926, updated on 10-Oct-2024

    Summary

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    Official Symbol
    BCAT1provided by VGNC
    Official Full Name
    branched chain amino acid transaminase 1provided by VGNC
    Primary source
    VGNC:VGNC:26439
    See related
    BGD:BT24315; Ensembl:ENSBTAG00000013825
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See BCAT1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (85057073..85181034)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal intermediate chain 7 Neighboring gene inositol 1,4,5-triphosphate receptor associated 2-like Neighboring gene inositol 1,4,5-triphosphate receptor associated 2 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene SRY-box transcription factor 5 Neighboring gene chromobox protein homolog 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC148803

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables branched-chain-amino-acid transaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-leucine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in L-valine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    branched-chain-amino-acid aminotransferase, cytosolic
    Names
    branched chain aminotransferase 1, cytosolic
    NP_001077113.1
    XP_005206990.2
    XP_005206991.1
    XP_059742171.1
    XP_059742172.1
    XP_059742173.1
    XP_059742174.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001083644.1 → NP_001077113.1  branched-chain-amino-acid aminotransferase, cytosolic

      See identical proteins and their annotated locations for NP_001077113.1

      Status: PROVISIONAL

      Source sequence(s)
      BC134713
      UniProtKB/TrEMBL
      A0A3Q1LVA2, A4IFQ7
      Related
      ENSBTAP00000018370.4, ENSBTAT00000018370.5
      Conserved Domains (2) summary
      PRK13357
      Location:39 → 386
      PRK13357; branched-chain amino acid aminotransferase; Provisional
      cd01557
      Location:80 → 375
      BCAT_beta_family; BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and ...

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      85057073..85181034
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059886188.1 → XP_059742171.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X2

    2. XM_005206933.5 → XP_005206990.2  branched-chain-amino-acid aminotransferase, cytosolic isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LVA2
      Related
      ENSBTAP00000091020.1, ENSBTAT00000104984.1
      Conserved Domains (2) summary
      PRK13357
      Location:51 → 398
      PRK13357; branched-chain amino acid aminotransferase; Provisional
      cd01557
      Location:92 → 387
      BCAT_beta_family; BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and ...

    3. XM_059886189.1 → XP_059742172.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X3

      UniProtKB/TrEMBL
      A0A3Q1ML78
      Related
      ENSBTAP00000071727.1, ENSBTAT00000086973.2

    4. XM_005206934.5 → XP_005206991.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X4

      See identical proteins and their annotated locations for XP_005206991.1

      UniProtKB/TrEMBL
      A0A3Q1LVA2, A0AAA9SIM4
      Related
      ENSBTAP00000083611.1, ENSBTAT00000116404.1
      Conserved Domains (2) summary
      PRK13357
      Location:38 → 385
      PRK13357; branched-chain amino acid aminotransferase; Provisional
      cd01557
      Location:79 → 374
      BCAT_beta_family; BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and ...

    5. XM_059886190.1 → XP_059742173.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X5

    6. XM_059886191.1 → XP_059742174.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X5

    Nucleotide Protein Strain
    Heading Accession and Version

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